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Detailed information on CNT3070513


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7XT99|AKR2_ORYSJ, E-value = 2e-57

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639567Quercus suberNymphaea colorata22.9123.4279.49156forward
CNT30316626Quercus suberCorylus avellana49.7866.3487.61339forward
CNT30700582Quercus suberQuercus lobata58.1599.2594.7396forward
CNT30500052Quercus suberCoffea canephora23.9462.2182.82163forward
CNT30492602Quercus suberOlea europaea23.223.6279.75158forward
CNT30566880Quercus suberActinidia chinensis33.3324.4983.7227forward
CNT30586652Quercus suberMusa acuminata24.6718.8182.14168forward
CNT30146672Quercus suberMedicago truncatula25.8474.2685.23176forward
CNT3059952Quercus suberArabidopsis lyrata16.4533.3384.82112forward
CNT3076889Quercus suberBrassica juncea16.4525.8183.04112forward
CNT30450529Quercus suberSaccharum spontaneum14.3922.7982.6598forward
CNT30133477Quercus suberLolium perenne11.3138.1284.4277forward
CNT30206611Quercus suberHelianthus annuus11.7522.7386.2580forward
CNT30129081Quercus suberCorymbia citriodora23.9431.3580.37163forward
CNT30479817Quercus suberArabidopsis halleri18.0633.4282.93123forward
CNT30152051Quercus suberPrunus persica40.9735.5486.74279forward
CNT30570762Quercus suberVitis vinifera23.9439.2886.5163forward
CNT30704154Quercus suberPrunus avium51.143.7783.91348forward
CNT3022456Quercus suberPopulus trichocarpa33.9233.1980.52231forward
CNT30328922Quercus suberAsparagus officinalis36.7140.8580250forward
CNT30120862Quercus suberCitrus clementina30.2537.8785.44206forward
CNT30114984Quercus suberEutrema salsugineum18.0642.7184.55123forward

Expression of CNT3070513

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MKKVVGFQNPSKLQHPLYICRPSRHPQQQMIQVQPFLLVSVSQTELQCFG*

Sequence

>CNT3070513
AATCGAGGTCGTTGAAGCTGGTATGATTATAATTTAAAAGCATATATTATTTTCAGCATAACGTACTTATTCTTTAAGCAGTTGAGAACTCAACCTAAAC
TCAATGTACTTGTTGATACATGACGAATGACAAAAGCTCATGAAACTCACATACACATTGATACATAGAAATAGACTTGTGCTTATGTAGCTTTCCATGA
AGAAAGTGGTGGGGTTTCAGAATCCTTCCAAGTTGCAACATCCTTTGTATATCTGTCGCCCTTCACGACATCCTCAGCAGCAAATGATTCAAGTTCAACC
ATTTCTTCTGGTGTCAGTTTCACAGACAGAGCTCCAATGTTTTGGTTAAAGTTTTCAATCTTGGTGGTTCCAGGTATGGGACACACGTCCTTTCCTTGGT
GATGAACCCAAGCAAGTGCTAGTTGTGATGGGGTGCATCCCTTCCTTGCTGCCATTTCATTAACACGCTCAAATATGGTTTTGTTATGCTCTAGATTTTC
AAGTTGGAACCTAGGTAGGAACTGCAAGTAGCAACTACATATATTAGCTAGCATCAGGACTGAATCACGAAACAACAACAGAGACTTTCATGGAGGCAGG
GTCACTACTCATTCTGTCATTCATAAAGCCAATGATATTTACACATTAAAATACTCATTGTTATCAGCATCAAGACTTCAT