Detailed information on CNT30704865


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG85|UBI1P_NICSY, E-value = 7e-163

BLAST vs NONCODE:
NONMEST001181, E-value = 4e-160

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30528977Prunus aviumEucalyptus grandis82.3268.4386.26917forward
CNT30157648Prunus aviumPistacia vera81.7866.9484.74911forward
CNT30689798Prunus aviumTriticum urartu81.6979.7587.58910forward
CNT30153667Prunus aviumPrunus persica68.4975.0294.76763forward

Expression of CNT30704865

Peptides detected in this lncRNA

>peptide 1 (47 aa)
TDQIITQEQIYLLNIEYQETKLVEMPHQEAETVPRNLKKQKQLNIVL*

>peptide 2 (40 aa)
MVSELSTSRVMVLPVRVLTKICMPPRRRSTKWRVDSFWML*

>peptide 3 (70 aa)
MVSELSTSKVIVFPVRVFTKICIPPRRRSTKWRVDSFWMLYQQGYGHPRAAFRQRSASAGLVGCPPYLES*

>peptide 4 (40 aa)
MVSELSTSRVMVLPVRVLTKICIPPRRRSTKWRVDSFWML*

>peptide 5 (37 aa)
MESGLLLDVVSARVRPSSSCFPAKISLCWSGGMPSLS*

>peptide 6 (34 aa)
MPSLSWILALTLSMVSDDSTSRVMVLPVRVFTKIC

Sequence

>CNT30704865
GCACAGACCAAATTATTACCCAAGAACAAATTTATTTATTAAACATAGAGTATCAGGAAACCAAACTAGTTGAAATGCCTCACCAAGAGGCAGAAACAGT
ACCACGAAACTTGAAAAAACAAAAACAATTAAACATAGTTTTATAGGAACCACCGAAACATTCATAACAAGCAGGGTGACAACCGAGACTTCCACTTCTT
AGAAACCACCACGGAGACGGAGGACAAGGTGAAGGGTAGACTCCTTCTGAATATTGTAGTCAGCCAAAGTACGGCCGTCCTCCAGCTGCTTCCCTGCAAA
GATCAACCTCTGCTGGTCTGGTGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCCGAGCTCTCGACCTCCAAAGTGATAGTC
TTTCCGGTCAGGGTCTTCACGAAGATCTGCATACCACCACGGAGACGAAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTATCAGCAAGGGTACG
GCCATCCTCGAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTTATCTTGAATCTTAGCCTTGACGTTGTCAATGGTGTCG
GAGCTTTCGACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATGCCACCACGCAGACGAAGCACTAAGTGGAGGGTTGACTCCT
TCTGGATGTTGTAGTCTGCGAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGGATACCTTCCTTGTCTTGAAT
TTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCGACCTCGAGGGTGATGGTCTTACCGGTGAGGGTCTTGACGAAGATCTGCATACCACCACGCAGA
CGGAGCACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCTGCGAGGGTACGGCCGTCCTCTAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGAT
CTGGAGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCAGATGACTCCACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTTTT
CACGAAGATTTGCA