Detailed information on CNT30704856


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG85|UBI1P_NICSY, E-value = 2e-163

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-160

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30652285Prunus aviumRosa chinensis76.4875.3588.77917forward

Expression of CNT30704856

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MQTTDLTRTNNKHRPNYYPRTNLFIKHRVSGNQTS*

>peptide 2 (34 aa)
MPSLSWILALTLSMVSDDSTSRVMVLPVRVFTKIC

>peptide 3 (30 aa)
MVSELSTSKVIVFPVRGLHKNLHTTTETKH*

>peptide 4 (75 aa)
MESGLLLDVVVSKGTAILELLSGKDQPLLVWWDALLILNLSLDVVNGVGAFDLQGDGLAGEGLDEDLHATTQTKH*

>peptide 5 (40 aa)
MVSELSTSRVMVLPVRVLTKICMPPRRRSTKWRVDSFWML*

>peptide 6 (40 aa)
MVSELSTSRVMVLPVRVLTKICIPPRRRSTKWRVDSFWML*

Sequence

>CNT30704856
AGGACACATTATGCTGCCCAAATAGCTTTACCATCCGCAAATAGATCATGCAAACAACAGATTTAACTCGAACAAACAACAAGCACAGACCAAATTATTA
CCCAAGAACAAATTTATTTATTAAACATAGAGTATCAGGAAACCAAACTAGTTGAAATGCCTCACCAAGAGGCAGAAACAGTACCACGAAACTTGAAAAA
ACAAAAACAATTAAACATAGTTTTATAGGAACCACCGAAACATTCATAACAAGCAGGGTGACAACCGAGACTTCCACTTCTTAGAAACCACCACGGAGAC
GGAGGACAAGGTGAAGGGTAGACTCCTTCTGAATATTGTAGTCAGCCAAAGTACGGCCGTCCTCCAGCTGCTTCCCTGCAAAGATCAACCTCTGCTGGTC
TGGTGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCCGAGCTCTCGACCTCCAAAGTGATAGTCTTTCCGGTCAGGGGTCTT
CACAAAAATCTGCATACCACCACGGAGACGAAGCACTAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGGCCATCCTCGAGCTGC
TTTCCGGCAAAGATCAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTTATCTTGAATCTTAGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCGACCTCCA
GGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATGCCACCACGCAGACGAAGCACTAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTC
TGCGAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGGATACCTTCCTTGTCTTGAATTTTGGCCTTGACGTTG
TCAATGGTGTCGGAGCTTTCGACCTCGAGGGTGATGGTCTTACCGGTGAGGGTCTTGACGAAGATCTGCATACCACCACGCAGACGGAGCACCAAATGGA
GGGTTGACTCCTTCTGGATGTTGTAGTCTGCGAGGGTACGGCCGTCCTCTAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCTGGAGGGATGCCCTC
CTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCAGATGACTCCACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTTTTCACGAAGATTTGCAT