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Detailed information on CNT30704854


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG85|UBI1P_NICSY, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30532384Prunus aviumEucalyptus grandis77.0692.7882.91374forward
CNT30279021Prunus aviumChenopodium quinoa72.7499.4683.421297forward
CNT30636316Prunus aviumCapsicum annuum64.3955.3886.151148forward
CNT3096920Prunus aviumSolanum tuberosum59.2388.3784.941056forward
CNT3086353Prunus aviumVigna radiata63.8853.1583.581139forward
CNT30538027Prunus aviumBrassica napus74.9370.4684.511336forward
CNT30145547Prunus aviumMedicago truncatula73.8666.1882.991317forward
CNT30312399Prunus aviumCamelina sativa64.2787.7584.121146forward
CNT30608559Prunus aviumGossypium raimondii63.8874.6484.021139forward
CNT30217449Prunus aviumKalanchoe fedtschenkoi63.8875.4885.071139forward
CNT30623426Prunus aviumDaucus carota62.5961.9386.561116forward
CNT30689804Prunus aviumTriticum urartu76.7863.7986.341369forward
CNT30423866Prunus aviumPapaver somniferum61.9286.3284.151104forward
CNT30110940Prunus aviumOryza longistaminata63.2141.5682.791127forward
CNT30321313Prunus aviumAsparagus officinalis60.5282.383.871079forward
CNT30595410Prunus aviumEragrostis curvula63.3882.8484.161130forward
CNT30174646Prunus aviumVigna angularis49.6985.0385.78886forward
CNT30111644Prunus aviumFicus carica69.186.4684.741232forward
CNT30334105Prunus aviumCynara cardunculus76.7858.0683.561369forward
CNT30726149Prunus aviumLupinus angustifolius51.0947.8585.73911forward
CNT30114931Prunus aviumEutrema salsugineum51.3782.684.72916forward

Expression of CNT30704854

Peptides detected in this lncRNA

>peptide 1 (32 aa)
IIPIVCIQTNNSTAANDNQDTLCCPNSFTIRK*

>peptide 2 (35 aa)
MQTTDLTRTNNKHRPNYYPRTNLFIKHRVSGNQTS*

>peptide 3 (40 aa)
MVSELSTSRVMVLPVRVLTKICIPPRRRSTKWRVDSFWML*

>peptide 4 (40 aa)
MVSELSTSRVMVFPVRVFTKICIPPRRRSTKWRVDSFWML*

>peptide 5 (40 aa)
MVSELSTSRVMVLPVRVLTKICMPPRRRSTKWRVDSFWML*

>peptide 6 (59 aa)
MPSLSWILALTLSMVSDDSTSRVMVLPVRVFTKICIYRNQNHISIGFTVSRSKVLISVNN

>peptide 7 (40 aa)
MVSELSTSKVIVFPVRVFTKICIPPRRRSTKWRVDSFWML*

>peptide 8 (75 aa)
MESGLLLDVVVSEGTAILQLLPCKDQPLLVRWDTLLVLDLRLDIVNGVRALDLQSDGLSCQGLHKNLHTTTETKH*

>peptide 9 (75 aa)
MESGLLLDVVVSKGTAILELLSGKDQPLLVWWDALLILNLSLDVVNGVGAFDLQGDGLAGEGLDEDLHATTQTKH*

Sequence

>CNT30704854
AATAATTCCAATAGTATGCATACAAACAAATAATTCAACCGCTGCAAACGATAACCAGGACACATTATGCTGCCCAAATAGCTTTACCATCCGCAAATAG
ATCATGCAAACAACAGATTTAACTCGAACAAACAACAAGCACAGACCAAATTATTACCCAAGAACAAATTTATTTATTAAACATAGAGTATCAGGAAACC
AAACTAGTTGAAATGCCTCACCAAGAGGCAGAAACAGTACCACGAAACTTGAAAAAACAAAAACAATTAAACATAGTTTTATAGGAACCACCGAAACATT
CATAACAAGCAGGGTGACAACCGAGACTTCCACTTCTTAGAAACCACCACGGAGACGGAGGACAAGGTGAAGGGTAGACTCCTTCTGAATGTTATAGTCA
GCCAGAGTCCTTCCATCCTCCAACTGCTTACCGGCAAAGATCAACCTCTGCTGGTCTGGAGGAATACCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGT
CGATTGTGTCCGAGCTCTCCACCTCCAAAGTGATGGTCTTTCCAGTCAAGGTCTTCACAAAGATCTGCATACCACCCCTCAGACGCAGCACAAGGTGAAG
GGTAGACTCCTTCTGAATATTGTAGTCAGCCAAAGTACGGCCGTCCTCCAGCTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCTGGTGGGATCCCCTCC
TTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCCGAGCTCTCGACCTCCAAAGTGATAGTCTTTCCGGTCAGGGTCTTCACGAAGATCTGCATAC
CACCACGGAGACGAAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTACGGCCATCCTCCAGCTGCTTCCCTGCAAAGATCAA
CCTTTGCTGGTCCGGTGGGATACCCTCCTTGTCCTGGATCTTCGCCTTGACATTGTCAATGGTGTCCGAGCTCTCGACCTCCAGAGTGATGGTCTTTCCT
GTCAGGGTCTTCACAAAAATCTGCATACCACCACGGAGACGAAGCACTAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGGCCAT
CCTCGAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTTATCTTGAATCTTAGCCTTGACGTTGTCAATGGTGTCGGAGCT
TTCGACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATGCCACCACGCAGACGAAGCACTAAGTGGAGGGTTGACTCCTTCTGG
ATGTTGTAGTCTGCGAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGGATACCTTCCTTGTCTTGAATTTTGG
CCTTGACGTTGTCAATGGTGTCGGAGCTTTCGACCTCGAGGGTGATGGTCTTACCGGTGAGGGTCTTGACGAAGATCTGCATACCACCACGCAGACGGAG
CACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCTGCGAGGGTACGGCCGTCCTCTAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCTGGA
GGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCAGATGACTCCACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTTTTCACGA
AGATTTGCATCTACAGGAACCAAAATCACATAAGCATTGGTTTCACAGTTTCAAGATCAAAAGTTCTAATTTCGGTAAACAAC