Detailed information on CNT30704500


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9C7S5|PSYR1_ARATH, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3021173Prunus aviumCitrullus lanatus8.244.8684.21323forward
CNT30559962Prunus aviumActinidia chinensis9.4261.9483.56371forward
CNT30233824Prunus aviumBrassica oleracea3.9135.1683.12154forward
CNT30552618Prunus aviumOryza glaberrima2.7222.0283.18107forward
CNT30718834Prunus aviumMalus domestica golden10.6699.0685.71420forward
CNT30686777Prunus aviumTriticum urartu4.2124.0981.93166forward
CNT30722486Prunus aviumTriticum spelta2.8723.3582.3113forward

Expression of CNT30704500

Peptides detected in this lncRNA

>peptide 1 (51 aa)
CCTQPTNSLDALGLHTSKGLFPVSSSSMTTPKLYISPLNVATHACPYSGGM*

>peptide 2 (62 aa)
MSLVRKNQPGQPKISNMCLKFIIQEDVAGLDITMHNVWLTYLVHVSQPAGCSLCNLQSSWPI*

>peptide 3 (54 aa)
MTKVQHMNKLQSANLNGDTAIKAVVTQIYGWGEVGQLIVLLISSIIGLHKYWQL*

>peptide 4 (77 aa)
MTKLVSLSSSGVTAVAEWLDIVSKSILSVSPPGMILLLDNIHTISITTINTIPKQIPEVSPIRRFLLDLRAAAGGNG*

>peptide 5 (63 aa)
MRRLKLKSMTWRLEREENKSSGREPRKELWERLRWVRWVRLVIDGWMTPVKPLLGSHSRTTRP*

>peptide 6 (96 aa)
MWSSRFSNLERLPIWLGIGPENWFEKSSRVWRLVRFKIPSLMGPVRLLTGRESCRRSARLKISSGREPERLLKPARKTWSLEHNPIPGGIVSLSLL*

>peptide 7 (91 aa)
MMMAMMMMILHHKSLACIVGLGYSHIKGKSFLLYFFFFKYSFQHLPIIYFLLLLFLFSFFSFLFLDVFFGCFALLGLLLKPDRELRRRPIS*

>peptide 8 (38 aa)
MGIDPEKLLLLTLKMDTDGTRIEDGIVPLKKLLDKFRT*

>peptide 9 (30 aa)
MSKLASHRGHYEIRLEGGYWTNQCRKGWAD*

>peptide 10 (34 aa)
MHTIALQGNQILMLGSGQCLNFCFEFPFHQTQVS*

>peptide 11 (35 aa)
MEETIIIINHRKKRLLCGRLVVAVGVVGAVGHFLI*

>peptide 12 (38 aa)
MRKEGWYSSCYCRYLHLPLVVFHRNKRRRHEDSLFLSL*

Sequence

>CNT30704500
TTGCTGCACCCAGCCAACCAACTCTCTCGATGCCCTTGGCTTGCATACCTCAAAAGGCCTTTTTCCGGTTAGCAGCTCAAGCATGACAACCCCAAAACTG
TACATATCTCCTCTCAATGTGGCCACCCATGCTTGTCCATACTCTGGAGGAATGTAACCAAGGGTACCAACAAGCTCAGTTGTAACATGAGTCTGGTACG
GAAGAATCAACCGGGACAACCCAAAATCAGCAACATGTGCTTGAAATTTATCATCCAGGAGGATGTTGCTGGACTTGATATCACGATGCACAATGTGTGG
CTCACATATTTGGTGCATGTAAGCCAACCCGCAGGCTGCTCCCTGTGCAATCTTCAGTCGAGTTGGCCAATCTAACTGGGAAGCACCATCAGCTTTCTCA
TGCAACCAGTAATCCAGACTTCCATTTTCCATATAGGAATATATTAACAGGCGAACTCCATCATGCACACAATAGCCTTGCAGGGAAACCAGATTCTCAT
GTTGGGCAGTGGACAGTGCCTCAACTTCTGCTTTGAATTCCCTTTCCATCAGACCCAAGTCTCCTGAGAGTTTCTTAACAGCTAGCCTGGTCCCATTTGC
GAATGTTGCACTGTAAACCAGACCAAAACCTCCACAGCCAATGATGTTTGCTTGATTGAAATTGTCAGTTGCCTTTAAGATTTCAGTTATAGTAAGATCC
TTGATTTCATTGGTATTGGTTGGGAACACTATGACTAAGCTGGTATCCTTGTCAAGCTCAGGAGTAACAGCAGTGGCTGAATGGCTAGACATTGTGTCAA
AATCCATCTTGTCAGTATCTCCTCCTGGAATGATCCTTCTCTTAGACAACATCCACACTATTAGCATAACAACAATAAATACAATTCCAAAACAGATCCC
AGAGGTGAGTCCAATAAGAAGATTTTTGTTAGACCTTCGAGCAGCAGCCGGTGGTAATGGTTGAGGGCATGTGCGATGCACAGTTGGAGGACCACATAAG
CCTCGATTCCCTTCAAAGCTATAGATGGTAAAAGTATCAAACTGACCTCCAGATGGTATAAGTCCCTGAAGATCATTGTATGCCACACTGAAGGAAGACA
AGAAATGCAGACCTTTGAGAGAAACAGGGATTTCACCAGATAGATTGTTATAGGAAAGATCCAATTTCTCTAAGTTAGTGAGGTTAGAAATCTGATCTGG
GATGCTGCCAGAGAATTTGTTATGACTAAGGTCCAACACATGAATAAACTTCAATCGGCCAATCTCAATGGGGATACTGCCATTAAGGCTGTTGTTACTC
AAATATATGGCTGGGGGGAGGTTGGACAGTTGATTGTACTGCTGATCAGTAGCATTATTGGGCTTCACAAATACTGGCAACTCTAAATAACTTCTGTCCA
CCTTATCACTGGCCTCTTTCGATGTCAAAACTGGCATCCCACAGAGGTCATTATGAAATCCGCCTTGAAGGAGGTTATTGGACAAATCAATGTAGAAAAG
GTTGGGCAGACTAGCCAACCAACCGGGTAGAGAACCAGTTATAAGATTAAATGACAGGTCCAAGACTTGAAGATTTTTAAGCTTGCCTAGCCAGGTGGGT
ACTTGACCTGTGAATTGGCAACCCCCCAGCGCAAAAACCCGAAGACTCTGAAATCCATCTGGGTCTCCTAGGCTTTCATCATCTGGCACAGGCTCAAACA
GAAAATTCACGGACAGGACCAGAGTGGTCAAGTTCTTGCAACCCTTTAGAATCCTAAAAGCCCCAGTGGCATTTGTCAGATTGTTGGTAGAGATGGAGAG
GAAAGCCAAGGATTCTAATGCAACTATTTCAGGTGATATCTGTCCTGTGAGCTGATTATTGGCCAATCTAATAGCTGTTAATGACTTGCAAGAGTAGAGA
CTTTTGGGTAACTCACCAGTGAAGTTGTTGTTGCCAAGGTCCAGAGTGGTGAGGCGTTGGAGAGGGGAGAAGTTGAAGGAAGAGAGGTCTCCAGTCAAGT
TGTTGACCCTCAAATTCAAAGTGGACAGCTTTGTACTGTTGGCGAGAGATAGAGGTAAGGGACCTGTGAGGTTGTTGATGTGGAGCAGCAGATTTTCCAA
CCTGGAAAGGTTACCAATTTGGCTTGGGATTGGCCCAGAGAACTGGTTTGAAAAGAGCTCCAGGGTCTGGAGATTGGTGAGGTTCAAGATACCATCGTTG
ATGGGTCCTGTAAGACTATTGACAGGCAGAGAGAGCTGTCGGAGATCAGCAAGGTTGAAAATTTCATCAGGGAGAGAACCAGAGAGGCTATTGAAGCCTG
CACGGAAAACTTGGAGCTTGGAACATAATCCGATTCCAGGAGGAATTGTGTCATTGAGTTTATTGTAGGACAAGTCCAAGAAGGTAAGGGATGTGTGGTT
GCTATCGTTGTCGATGGGTATCGACCCGGAAAAGCTGTTGTTGCTGACATTGAAAATGGACACCGATGGGACAAGGATCGAAGATGGGATTGTTCCATTG
AAGAAATTGCTAGACAAGTTCAGAACCTGAAGCTTACTGATTTTATTTGAAGAAGGTGGTAGGCGGTCAATGAGACGATTGAAGCTCAAGTCAATGACTT
GGAGACTAGAGAGAGAGGAAAACAAATCATCAGGGAGAGAACCCAGGAAAGAATTGTGGGAAAGATTGAGGTGGGTGAGATGGGTGAGGCTTGTGATAGA
TGGATGGATGACACCAGTTAAGCCTCTCCTAGGCAGCCATAGCCGGACGACGCGTCCTTGATCATCTTGGGCGCAGGTTATTCCTTCCCAAAGGCAACAG
TCAGTGGAAGAAGACCAATTCAAATTCAAAGGGAGAGCCAAGGACAATAGAGCGTCCTTATCGAGCTGGTTACAAGCAGCAGAAGCAGAGCAAGGAAGAA
GAAGAAGAATGAAAACCCATTGACCCAAAAAGAGATGAGGAAGGAAGGTTGGTATTCTTCTTGTTATTGTCGGTACCTTCACCTTCCTCTTGTCGTGTTT
CATCGGAACAAGAGAAGAAGACATGAAGACTCTCTCTTTCTCTCTCTCTAACTCTCTCACTTAATCATACACAACAACATGCTGTAACACATATCACCAT
CAGCATCATCACAATCTATTGGAACCATATCAATTGGTAGAAGCAGCACCAATCTACCAAGATCCTACAGGTGTTTGAATAAATGGTTGAGAGAGCTAGC
TAGCTAGCTAGCCAAGCTAACCTGGTGCAGAAAGATTGGGTTTTTGGGGATTGCAGCAAAAACCCAATTGAGCAATTGACCCAGAGAAACAAAGACAGAG
AGAGGTTGGGTTGGGGGAGCTGCTGTGCCTATGTGAAGACAACTGACGTTGACATGGAAGAGACGATAATAATAATAAATCACAGGAAGAAGCGTTTACT
TTGTGGGCGGCTGGTAGTGGCTGTTGGTGTTGTTGGTGCTGTTGGACATTTTCTAATCTAGTAATCATGATGATGGCGATGATGATGATGATCCTTCACC
ACAAGAGCTTAGCGTGTATAGTAGGATTAGGATATTCACATATCAAAGGCAAAAGCTTTCTTCTTTATTTTTTCTTTTTCAAATATTCGTTTCAGCACTT
GCCCATTATTTATTTTCTTCTTCTTCTTTTTCTTTTTTCTTTTTTCTCATTTCTCTTTCTCGACGTCTTCTTCGGTTGCTTTGCTTTGCTTGGCTTGCTG
CTTAAGCCCGACAGAGAGCTGAGGAGGAGACCGATAAGCTAACGCAGCAAATGGGTTTTGCATCCGGCAAGTGACAGATTGGAGATTTGGGTTTGGTTGG
TTGGTCAATTTGGTAAATGATGGGGTTTGGAATCTTTCAGATTGTTGGAGATAGAGAGGCAGTCAAGGTTGTAAGTGGCAGGTCAAGTGGTTAAGAAACT
AGGGATTTGGAAAAAGAATTGGGGCAAAATGTAGACTGCA