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Detailed information on CNT30704435


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6K215|PIP22_ORYSJ, E-value = 6e-95

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30698271Prunus aviumQuercus lobata21.3344.7686.52141forward
CNT30375565Prunus aviumArabidopsis thaliana11.229.9690.5474forward
CNT3019525Prunus aviumCitrullus lanatus9.9830.1486.3666forward
CNT30728842Prunus aviumCorchorus capsularis14.8328.2487.7698forward
CNT3070603Prunus aviumQuercus suber22.2438.6887.07147forward
CNT30525480Prunus aviumPhaseolus vulgaris27.538.5181.87182forward
CNT30632211Prunus aviumVigna unguiculata15.4333.5588.24102forward
CNT30712585Prunus aviumGlycine max13.4638.0385.3989forward
CNT3044723Prunus aviumPrunus dulcis92.7467.1495.76613forward
CNT30159576Prunus aviumPistacia vera25.5721.3481.66169forward
CNT30221191Prunus aviumHordeum vulgare7.4123.1189.849forward
CNT30569510Prunus aviumActinidia chinensis8.0225.4888.6853forward
CNT30592144Prunus aviumMusa acuminata7.4121.391.8449forward
CNT30145515Prunus aviumMedicago truncatula9.3825.3196.7762forward
CNT3082727Prunus aviumBrassica juncea15.2821.4485.15101forward
CNT30213185Prunus aviumHelianthus annuus21.6325.8682.52143forward
CNT30355349Prunus aviumLactuca sativa21.792484.03144forward
CNT30572629Prunus aviumVitis vinifera9.0822.5686.6760forward
CNT3024289Prunus aviumPopulus trichocarpa22.3930.281.08148forward
CNT30120512Prunus aviumCitrus clementina20.2744.8288.06134forward
CNT30116611Prunus aviumOryza nivara8.9329.2191.5359forward
CNT30176173Prunus aviumVigna angularis16.6436.0784.55110forward
CNT30112022Prunus aviumFicus carica26.6362.4179.55176forward
CNT3065055Prunus aviumSelaginella moellendorffii13.4624.1288.7689forward

Expression of CNT30704435

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MYKTALGSETLRAKNSPKIMPPKAQAMPRMPTPPHWSPLLWDL*

>peptide 2 (80 aa)
RDMGVSGISLGVSGREDSVDKNKGTNDFSSQASALVVPSRQLVGSTAILLVVCLLEGLHQPNTADCTQRLGYDVQNCPRQ*

>peptide 3 (66 aa)
MSFGRPSPTQHRRLHPKTGLRCTKLPSAVKPCEPRIVQRSCHQRPRRCRECQRRRIGLHCSGTCSQ*

Sequence

>CNT30704435
ACAGGGACATGGGAGTCTCTGGCATTTCTCTTGGGGTCAGTGGCAGAGAAGACAGTGTAGACAAGAACAAAGGTACCAATGATTTCAGCTCCCAAGCCAG
TGCCCTTGTTGTACCCAGCAGACAACTCGTTGGCTCCACCGCCATACTCCTCGTAGTATGTCTTTTGGAAGGCCTTCACCAACCCAACACCGCAGATTGC
ACCCAAAGACTGGGCTACGATGTACAAAACTGCCCTCGGCAGTGAAACCTTGCGAGCCAAGAATAGTCCAAAGATCATGCCACCAAAGGCCCAGGCGATG
CCGAGAATGCCAACGCCGCCGCATTGGTCTCCATTGCTCTGGGACTTGTAGCCAATGACGGTCAAAACGGTGATGTAAAGGAAGAGAAGGGTGGCAATGA
ACTCAGCAATAAGAGCTCTGTAAAAAGACCATTTGGTCAGCTCCTCAGCATCAAACAAGGGGGTTGGAGGAGGGTCATGGTAGTCTTTGGCTGCAAACTC
ACCATGCTCAGCTCCCTCTACATCTTTAGCCATGGCTTCTTCTGTGACTAAAAATTAAATTAGCTATCTGCTTGTTGTGGCTTGTGAAGTATGTGCTTTT
GGATTGGGGCTTGCTGTTGGGTTTGTGAGTGTGTAGGGGTATTTATGGGGGCACATTGAAA