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Detailed information on CNT30704201


BLAST search results

BLAST vs Swiss-Prot:
sp|P20121|PSAH_PEA, E-value = 4e-18

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693639Prunus aviumOryza sativa33.28.9884.8886forward
CNT30673198Prunus aviumSetaria viridis41.747.3782.41108forward
CNT30521234Prunus aviumSetaria italica41.714.9482.41108forward
CNT30532753Prunus aviumEucalyptus grandis28.5729.8485.1474forward
CNT30709492Prunus aviumGlycine max43.2423.7388.39112forward
CNT30241486Prunus aviumAvena sativa33.223.2483.7286forward
CNT3011150Prunus aviumZea mays41.712.7782.41108forward
CNT30338878Prunus aviumEragrostis tef33.211.0384.8886forward
CNT30367799Prunus aviumSorghum bicolor32.0512.7584.3483forward
CNT30370255Prunus aviumOryza glumipatula33.213.584.8886forward
CNT30101773Prunus aviumOryza rufipogon33.210.4484.8886forward
CNT30582819Prunus aviumEchinochloa crusgalli33.210.383.7286forward
CNT30496965Prunus aviumDigitaria exilis33.225.2984.8886forward
CNT30116717Prunus aviumOryza nivara33.210.4684.8886forward

Expression of CNT30704201

Peptides detected in this lncRNA

>peptide 1 (35 aa)
GGLNSALDILTSTKQRSNYIHMMKSFEDMENPKCN*

Sequence

>CNT30704201
AGGGGGTCTTAATTCTGCATTAGACATACTTACAAGTACAAAACAGAGAAGCAATTACATACACATGATGAAAAGCTTTGAAGATATGGAAAATCCCAAA
TGCAATTAGATCTTGCCACGTGGGCCTAGCTTGGGTGGAAGTTGTGGGGTGAGGGTGCATCTGAGCCGTACAAGTCCCACTTCCCGGTAGTGTTGCCCAG
ATCCTCAAGGTCAAAGTAGACACTTTTGTCTCCATACTTGGCCACCACAGCACCACTCC