Detailed information on CNT30704139


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3046844Prunus aviumPrunus dulcis10099.6195.84505forward
CNT30224947Prunus aviumHordeum vulgare17.2329.5990.887forward
CNT30309894Prunus aviumCamelina sativa15.4537.3294.8778forward
CNT3074464Prunus aviumBrassica juncea16.4420.0592.7783forward
CNT30260341Prunus aviumBrassica rapa16.4420.8592.7783forward
CNT30716113Prunus aviumMalus domestica golden34.4630.2687.36174forward
CNT30722009Prunus aviumTriticum spelta17.2320.7690.887forward
CNT30153721Prunus aviumPrunus persica98.22100.6195.56496forward
CNT30429165Prunus aviumPapaver somniferum15.4521.9794.8778forward

Expression of CNT30704139

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MLFMKVYLLCFMMQWAFQLIIFDNVCIWDHIRCQ

>peptide 2 (44 aa)
VCGLSGRPGPYEYIQVAAQRLGFRLIKNPVVASGAVAVIVLETQ*

Sequence

>CNT30704139
GTGTGTGGGCTTTCTGGGCGCCCAGGCCCATATGAATATATACAAGTCGCCGCACAGCGATTAGGGTTCAGACTCATTAAAAACCCTGTGGTTGCTTCTG
GAGCCGTCGCGGTCATCGTTTTGGAGACACAGTAGCAGCGTTTCTCAGCCAGGATGAGGGCCAAGTGGAAGAAGAAGCGTATGAGGAGGTTGAAGAGGAA
GCGCCGAAAGATGAGACAGAGATCAAAGTAGGCACCTTGTTGCTCCTTCATCTGCAACACCTTCTACCCATGTGAAGTTTTGTAGAGTGGAGGATGACTT
GAGTATCTGTGTTTAAGTTTTCATAGTTTTGGGATTTTAATTATGTGGATGTTAAATGTTTTATCAAGTTTTACTCTGCATTTAATTGCATAATTAAGTA
TGGATGCTGTTTATGAAAGTTTATTTATTGTGTTTTATGATGCAATGGGCTTTTCAATTGATAATTTTTGATAATGTATGCATCTGGGATCATATTAGAT
GTCAA