Detailed information on CNT30703743


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30538642Quercus lobataBrassica napus51.0760.8584.62143reverse complement
CNT30261746Quercus lobataBrassica rapa51.0760.8584.62143reverse complement

Expression of CNT30703743

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVQLSTWNGRARNLRILTLPSESNHCSISLIPSLELQASAT

>peptide 2 (40 aa)
TRLTRQFGFRSTPAPRYPSTVESGRFSLLCETSLTLCPPR*

>peptide 3 (68 aa)
PDSQGNLGSEAHQPPVILPLLRAGGFRCSVKPASRCALHARNHKTQAFAQVTWFNSQLGTGEPGTCAF*

Sequence

>CNT30703743
ACCCGACTCACAAGGCAATTTGGGTTCAGAAGCACACCAGCCCCCCGTTATCCTTCCACTGTTGAGAGCGGGAGGTTTTCGCTGCTCTGTGAAACCAGCC
TCACGCTGTGCCCTCCACGCTAGGAACCACAAGACCCAGGCCTTCGCCCAAGTCACATGGTTCAACTCTCAACTTGGAACGGGCGAGCCAGGAACTTGCG
CATTCTGACCCTACCAAGTGAATCAAATCATTGTTCCATCTCTCTGATACCCTCGCTCGAGTTACAAGCCAGCGCTACCT