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Detailed information on CNT30702777


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30378945Quercus lobataManihot esculenta11.3533.0189.8669forward
CNT30631336Quercus lobataVigna unguiculata9.724.8991.5359forward
CNT30234855Quercus lobataBrassica oleracea14.4729.4385.2388forward

Expression of CNT30702777

Peptides detected in this lncRNA

>peptide 1 (35 aa)
AGSKQLCEKQGHQDLGTMTHCWNQLRAPNPVVLIV*

>peptide 2 (48 aa)
MEYLKNIVNNQKYLKMLGAIYGWRTLSTLIPGTIFCSTRTSTIFLPSM*

Sequence

>CNT30702777
GCTGGTAGTAAGCAGCTGTGCGAGAAGCAAGGCCATCAAGACCTTGGCACCATGACTCATTGTTGGAACCAACTAAGGGCACCAAACCCTGTTGTTCTCA
TTGTTTAAACCGTACATTAATTAGTATTGTTATCCTTGGAAACAAAATATCTTAATACATGCATTTATATGAACTTATTCATGTTGACATATAAGAAGTC
AAGTGCATCTTAGGTCATCAAAAATGCTCCAATTATCTTTTTTCATCACAACACACACACACAAATCCATGTAGAAATGCATCTAGTTATTAGTCAATGA
ACATAATTTTCATGATAGCTAAGATAGATTGAAGACCAAAAGGCAAAAGTTATATATAAACTGGAATGGAATACTTGAAAAACATTGTCAACAACCAAAA
GTATCTAAAAATGCTAGGAGCAATTTATGGGTGGCGTACCTTGTCGACTTTGATACCGGGTACAATTTTTTGCTCAACAAGAACATCCACTATCTTTTTA
CCATCGATGTAATTGCCCAGGCCAGGAGCTGTGACAAGGAGGGTACGGTATGCTTGGCGGTTAGCCTCAGTGTTCTCTAACCCAATAGAAGCTAGACGTT
TCCCACAT