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Detailed information on CNT30702366

BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 1e-14

BLAST vs NONCODE:
NONORUT000586, E-value = 5e-116

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30670969	Quercus lobata	Setaria viridis	100	87.29	98.49	996	forward
CNT30524649	Quercus lobata	Setaria italica	98.9	29.88	98.17	985	reverse complement
CNT30641383	Quercus lobata	Nymphaea colorata	100	31.88	95.98	996	reverse complement
CNT30550219	Quercus lobata	Ipomoea triloba	100	22.94	99.3	996	reverse complement
CNT30378673	Quercus lobata	Arabidopsis thaliana	30.32	24.22	98.01	302	forward
CNT30618996	Quercus lobata	Sesamum indicum	78.71	16.49	97.58	784	reverse complement
CNT30283003	Quercus lobata	Chenopodium quinoa	58.33	60.84	97.25	581	forward
CNT3020470	Quercus lobata	Citrullus lanatus	34.04	62.89	98.82	339	forward
CNT30730494	Quercus lobata	Corchorus capsularis	24.7	27.95	82.52	246	reverse complement
CNT30406993	Quercus lobata	Beta vulgaris	11.45	29.46	89.47	114	forward
CNT30632407	Quercus lobata	Vigna unguiculata	99.8	36.8	98.99	994	forward
CNT30504586	Quercus lobata	Nicotiana attenuata	100	56.56	98.29	996	reverse complement
CNT30712072	Quercus lobata	Glycine max	26.91	42.27	96.27	268	reverse complement
CNT30637481	Quercus lobata	Capsicum annuum	29.02	64.51	97.58	289	reverse complement
CNT3094274	Quercus lobata	Solanum tuberosum	21.29	71.86	99.53	212	forward
CNT30185187	Quercus lobata	Secale cereale	100	28.16	98.19	996	reverse complement
CNT30299053	Quercus lobata	Triticum aestivum	100	27.8	97.79	996	reverse complement
CNT30221833	Quercus lobata	Hordeum vulgare	92.37	67.4	96.41	920	reverse complement
CNT30394721	Quercus lobata	Triticum turgidum	100	27.19	98.09	996	reverse complement
CNT30569655	Quercus lobata	Actinidia chinensis	100	27.97	98.29	996	reverse complement
CNT30543278	Quercus lobata	Brassica napus	79.12	29.19	97.21	788	reverse complement
CNT30508923	Quercus lobata	Solanum lycopersicum	30.22	90.12	99.67	301	reverse complement
CNT30554477	Quercus lobata	Oryza glaberrima	38.86	53.53	96.9	387	forward
CNT30147396	Quercus lobata	Medicago truncatula	100	33.48	98.59	996	reverse complement
CNT30438197	Quercus lobata	Aegilops tauschii	100	95.13	98.29	996	reverse complement
CNT30258490	Quercus lobata	Avena sativa	36.35	50.14	98.34	362	reverse complement
CNT30660235	Quercus lobata	Triticum dicoccoides	73.9	78.21	97.42	736	forward
CNT30140161	Quercus lobata	Lolium perenne	100	29.26	98.49	996	reverse complement
CNT3017954	Quercus lobata	Zea mays	100.6	26.44	97.7	1002	reverse complement
CNT30605146	Quercus lobata	Gossypium raimondii	73.19	47.74	99.45	729	forward
CNT30216563	Quercus lobata	Kalanchoe fedtschenkoi	100	25.61	99.2	996	reverse complement
CNT3067980	Quercus lobata	Leersia perrieri	16.16	53.49	96.89	161	forward
CNT30655407	Quercus lobata	Rosa chinensis	100	29.79	98.9	996	reverse complement
CNT30202530	Quercus lobata	Helianthus annuus	57.73	78.44	98.78	575	reverse complement
CNT30718256	Quercus lobata	Malus domestica golden	30.32	98.69	87.75	302	reverse complement
CNT30628241	Quercus lobata	Daucus carota	100	36.89	99.3	996	forward
CNT30682011	Quercus lobata	Triticum urartu	95.68	97.74	98.11	953	reverse complement
CNT30721631	Quercus lobata	Triticum spelta	100	28.68	98.19	996	reverse complement
CNT30346087	Quercus lobata	Eragrostis tef	40.46	38.97	98.51	403	reverse complement
CNT30620564	Quercus lobata	Cajanus cajan	24.7	4.75	82.52	246	forward
CNT30356932	Quercus lobata	Lactuca sativa	56.22	28.28	97.86	560	reverse complement
CNT30369921	Quercus lobata	Oryza glumipatula	22.79	98.7	99.12	227	reverse complement
CNT30484250	Quercus lobata	Chara braunii	18.98	26.03	94.18	189	forward
CNT30429739	Quercus lobata	Papaver somniferum	100	30.96	94.18	996	reverse complement
CNT30571858	Quercus lobata	Vitis vinifera	100	28.74	99.6	996	forward
CNT30644906	Quercus lobata	Cannabis sativa	20.88	65	90.38	208	forward
CNT3056076	Quercus lobata	Amborella trichopoda	89.56	38.75	92.83	892	reverse complement
CNT30320583	Quercus lobata	Asparagus officinalis	26.81	24.34	98.5	267	reverse complement
CNT30118993	Quercus lobata	Citrus clementina	27.41	77.56	94.87	273	reverse complement
CNT3038324	Quercus lobata	Cucumis melo	100	52.81	97.99	996	forward
CNT30331625	Quercus lobata	Dioscorea rotundata	9.54	29.87	96.84	95	reverse complement
CNT3099709	Quercus lobata	Oryza rufipogon	21.69	9.92	99.54	216	reverse complement
CNT30499372	Quercus lobata	Digitaria exilis	91.37	26.77	98.46	910	reverse complement
CNT30603680	Quercus lobata	Oryza punctata	100	25.23	98.49	996	reverse complement
CNT30557400	Quercus lobata	Panicum hallii	63.96	46.43	96.55	637	reverse complement

Expression of CNT30702366

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MADFRLCSTSRSHSQAGLYHYAHEQNLSLSLPSHTSVTL*

>peptide 2 (29 aa)
FSTRSLHTSRCLHLSPIEVLFKNLVRELV*

>peptide 3 (67 aa)
LVRDRFTPRGAYTSRLSKFCSKTSSENLYREGFPAAQQFFHTNLAARRCYWHNNRYTIGWPNPVLSY*

Sequence

>CNT30702366
GTTTAGTACGAGATCGCTTCACACCTCGCGGTGCTTACACCTCTCGCCTATCGAAGTTCTGTTCAAAAACCTCGTCCGAGAACTTGTATAGAGAAGGATT
TCCCGCGGCGCAGCAGTTCTTCCATACCAACTTAGCTGCCCGGCGCTGCTATTGGCATAACAACCGGTACACCATAGGTTGGCCCAACCCAGTCCTCTCG
TACTAGGGTTGGCTCCTCGCAGTTCTCCCTTTAACACCAACGGTAGATAGGAATCGAACTGTCTCACGACGTTCTAAACCCAACTCACGTACCACTTGAA
TCGGCGAACAACCGAACCCTTGGGACCTTCTTCAACCCCAGGATGTGATGAGTCGACATCGAGGTGCCAAACGACTCCGTCGATAAGAGCTCTTGGGAGT
CATCAGCCTGTTATCCCCGGCGTACCTTTGATTCGTTGAGCGAGAGCCCTTCCACACGGGACTCCCGGATCACTATGGCCGACTTTCGTCTCTGTTCGAC
CAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCACGAGCAGAATCTTAGCTTGAGCCTACCTTCGCACACCTCCGTTACTCTTTAGGAGGCA
TCCGCCCCAGATAAACTACCCACCTCGCAGTGTCCCGCCCCCCCCCGAATTCTCGGTGCGGCGGTTAGGCATCCTTAGACGAAAGAGTGGTCTTTCAGGA
TTGGTCGTTGTGTGTCACCACCTCCCACCTATCCTACGCATTCGATCAAGGTTGTCACTGCGAAGCTATAGTTAAGGTGCACGGGGTCTTACCGTCTAGC
CGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATG
CGACAAGGAATTTCGCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGCTTATAACACTTCTCCTTCCGACCTT