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Detailed information on CNT30702258


BLAST search results

BLAST vs Swiss-Prot:
sp|P35007|SAHH_CATRO, E-value = 2e-94

BLAST vs NONCODE:
NONBNAT006042, E-value = 1e-56

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670523Quercus lobataSetaria viridis34.2645.186.34161forward
CNT30517189Quercus lobataJuglans regia32.5539.3387.58153forward
CNT30375086Quercus lobataArabidopsis thaliana61.740.4584.14290forward
CNT30619260Quercus lobataSesamum indicum61.727.2385.17290forward
CNT3020603Quercus lobataCitrullus lanatus53.8316.3486.96253forward
CNT3072357Quercus lobataQuercus suber62.1328.4397.95292forward
CNT30380073Quercus lobataManihot esculenta54.892586.05258forward
CNT30402445Quercus lobataBeta vulgaris23.424.7782.73110forward
CNT30628366Quercus lobataVigna unguiculata4013.1686.7188forward
CNT30200315Quercus lobataPisum sativum43.439.5385.29204forward
CNT30505192Quercus lobataNicotiana attenuata31.0625.8488.36146forward
CNT30709695Quercus lobataGlycine max21.0629.6485.8699forward
CNT30543653Quercus lobataBrassica napus48.5133.0484.21228forward
CNT3076639Quercus lobataBrassica juncea57.8742.5785.29272forward
CNT30259492Quercus lobataBrassica rapa38.5151.5784.53181forward
CNT30612249Quercus lobataArabis alpina41.4974.7185.13195forward
CNT30601056Quercus lobataFraxinus excelsior30.4326.4384.62143forward
CNT30607325Quercus lobataGossypium raimondii60.4322.0285.56284forward
CNT30231757Quercus lobataAnanas comosus19.5734.9886.9692forward
CNT30651401Quercus lobataRosa chinensis33.8359.3389.31159forward
CNT30720770Quercus lobataTriticum spelta35.1127.585.45165forward
CNT30365203Quercus lobataSorghum bicolor33.6273.4980.38158forward
CNT30355186Quercus lobataLactuca sativa47.6630.4384.82224forward
CNT30573685Quercus lobataVitis vinifera28.334.184.96133forward
CNT30705212Quercus lobataPrunus avium37.2347.5585.14175forward
CNT30645006Quercus lobataCannabis sativa34.6819.8185.28163forward
CNT3021984Quercus lobataPopulus trichocarpa34.047.4892.5160forward
CNT30329805Quercus lobataDioscorea rotundata3024.0286.52141forward
CNT30103876Quercus lobataOryza rufipogon35.1136.4286.06165forward
CNT30117878Quercus lobataOryza nivara35.1136.6786.06165forward
CNT30723196Quercus lobataLupinus angustifolius57.2333.7587.36269forward

Expression of CNT30702258

Peptides detected in this lncRNA

>peptide 1 (44 aa)
PKFAKVKCSNLLIKMLWQDIDLLLIFPGSPLLPQLKLCNHLVCE*

>peptide 2 (29 aa)
MAAAQPLPTSPYPATTATLPAIMTSVALIK

Sequence

>CNT30702258
CCCAAGTTTGCCAAGGTGAAGTGCAGCAACCTTCTCATCAAGATGCTTTGGCAAGACATAGACCTTCTTCTCATATTTCCCGGTAGTCCTCTCCTTCCAC
AGCTCAAGCTGTGCAATCACCTGGTTTGTGAATGAGCAAGACATCACGAAACTTGGGTGCCCTGTGGCACAACCCAAGTTCATAAGCCGACCCTCGGCCA
ACACAATGATGCCTGAGTTTGTATCAGGGAAGACCCACCTGTCTGTTTGGGGCTTGATGGTGATGCGCTTCACACCTGGATAGTTCTCAAGGGTTAGAAC
TTGGAGGCCTTCCATAAGGGCCTGAAGAGCGCAAATTGGATCAATCTCAGTCACAATCACACGGGCACCAGCTTGCTTCATGGCAGCAGCACAGCCCTTG
CCAACATCACCATATCCAGCAACAACAGCAACCTTGCCGGCAATCATGACATCAGTAGCCCTCATCAAAC