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Detailed information on CNT30701594


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 9e-164

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30274489Quercus lobataChenopodium quinoa86.5572.5582.55888forward
CNT30709517Quercus lobataGlycine max79.7388.0582.76818forward
CNT30156153Quercus lobataPistacia vera86.3576.9182.96886forward
CNT30624534Quercus lobataDaucus carota86.6549.9482.79889forward
CNT3027950Quercus lobataTheobroma cacao83.0497.4882.98852forward
CNT3026527Quercus lobataPopulus trichocarpa86.9491.383.52892forward
CNT30111644Quercus lobataFicus carica85.8761.8283.54881forward
CNT30726149Quercus lobataLupinus angustifolius84.2145.3882.52864forward

Expression of CNT30701594

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSKVIVLPVKVLTKICIPPLSRSTRWRVDSFWML*

>peptide 2 (58 aa)
KASLEHIRSHYTMASKLITDRQKPKSTNIEILKAMDSNTKSQPSKLRNHHGGEGQGAE*

Sequence

>CNT30701594
TAAAGCAAGTTTAGAACATATTAGGAGCCATTATACAATGGCAAGTAAACTGATAACAGATAGACAAAAACCAAAAAGCACCAACATTGAAATACTCAAG
GCAATGGACTCGAACACAAAATCACAACCATCCAAGCTTAGAAACCACCACGGAGGCGAAGGACAAGGTGCAGAGTAGACTCCTTTTGGATATTGTAATC
AGCCAGAGTCCTTCCATCTTCCAACTGCTTGCCAGCAAAAATCAGCCTCTGTTGGTCCGGTGGGATACCCTCCTTGTCTTGGATCTTAGCTTTAACATTA
TCGATAGTATCTGAACTCTCAACCTCCAAAGTAATTGTTTTGCCAGTCAAGGTCTTAACAAAAATTTGCATTCCACCTCTAAGCCGGAGCACCAGGTGAA
GGGTGGATTCCTTTTGTATGTTGTAGTCGGCAAGTGTGCGACCATCTTCGAGTTGTTTACCGGCAAAGATCAACCTCTGCTGGTCTGGTGGGATACCCTC
CTTGTCTTGAATTTTGGCTTTGACGTTATCAATGGTGTCAGAGCTCTCAACTTCCAAAGTAATTGTTTTGCCAGTCAAGGTCTTAACAAAAATTTGCATT
CCACCTCTGAGCCGGAGCACCAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCTGCGAGGGTGCGACCATCTTCAAGCTGCTTGCCGGCAAAGATCA
ACCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGGATCTTAGCTTTAACATTATCTATAGTGTCTGAGCTTTCAACTTCCAAAGTTATGGTCTTCCC
AGTAAGGGTTTTAACAAAGATTTGCATACCACCACGGAGGCGGAGCACCAAGTGAAGTGTGGACTCCTTTTGGATGTTATAGTCTGCCAAAGTGCGACCA
TCTTCGAGTTGCTTACCGGCAAAGATCAACCTCTGCTGATCTGGTGGGATACCCTCCTTGTCTTGGATCTTAGCTTTGACATTATCAATAGTGTCTGAGC
TTTCGACCTCGAGGGTGATGGTCTTG