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Detailed information on CNT30701585


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 5e-159

BLAST vs NONCODE:
NONMEST001181, E-value = 4e-129

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30626164Quercus lobataDaucus carota65.6224.6483.94691forward
CNT30726539Quercus lobataLupinus angustifolius65.0572.0383.5685forward

Expression of CNT30701585

Peptides detected in this lncRNA

>peptide 1 (58 aa)
KASLEHIRSHYTMASKLITDRQKPKSTNIEILKAMDSNTKSQPSKLRNHHGGEGQGAE*

Sequence

>CNT30701585
TAAAGCAAGTTTAGAACATATTAGGAGCCATTATACAATGGCAAGTAAACTGATAACAGATAGACAAAAACCAAAAAGCACCAACATTGAAATACTCAAG
GCAATGGACTCGAACACAAAATCACAACCATCCAAGCTTAGAAACCACCACGGAGGCGAAGGACAAGGTGCAGAGTAGACTCCTTTTGGATATTGTAATC
AGCCAGAGTCCTTCCATCTTCCAACTGCTTGCCAGCAAAAATCAGCCTCTGTTGGTCCGGTGGGATACCCTCCTTGTCTTGGATCTTAGCTTTAACATTA
TCGATAGTATCTGAACTCTCAACCTCCAAAGTAATTGTTTTGCCAGTCAAGGTCTTAACAAAAATTTGCATTCCACCTCTGAGCCGGAGCACCAGGTGGA
GGGTGGACTCCTTTTGGATGTTGTAGTCTGCGAGGGTGCGACCATCTTCAAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGTGGGATACCCTC
CTTGTCTTGGATCTTAGCTTTAACATTATCTATAGTGTCTGAGCTTTCAACTTCCAAAGTTATGGTCTTCCCAGTAAGGGTTTTAACAAAGATTTGCATA
CCACCACGGAGGCGGAGCACCAAGTGAAGTGTGGACTCCTTTTGGATGTTATAGTCTGCCAAAGTGCGACCATCTTCGAGTTGCTTACCGGCAAAGATCA
ACCTCTGCTGATCTGGTGGGATACCCTCCTTGTCTTGGATCTTAGCTTTGACATTATCAATAGTGTCTGAGCTTTCGACCTCGAGGGTGATGGTCTTGCC
TGTCAGAGTCTTAACAAAGATCTGCATCTGTTTAATTATTCAAAATATAAGTTAGAAACTAATGTTATCCTAACTGGGTCAGACAAGAATAATCACACAT
ACATACATTCAAAATTGATTAAAACAAGAACTAGAAGAATAATAGGCAACGCTTCATAAAGGTTAATGGAGTGATTCTTATGTACAAGAGTGAACTGCTG
TTGCAATTTAAAACATTCAATTAAGTATCTCTTTAGATATATTTACAATTCAC