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Detailed information on CNT30701241


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 6e-171

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3094992Quercus lobataSolanum tuberosum86.6576.3783.69889forward
CNT30605652Quercus lobataGossypium raimondii86.3589.8683.18886forward
CNT30429148Quercus lobataPapaver somniferum82.9463.4683.55851forward
CNT30706355Quercus lobataPrunus avium86.4557.7183.99887forward
CNT30642981Quercus lobataCannabis sativa84.4177.1883.37866forward
CNT30330510Quercus lobataDioscorea rotundata85.8793.8280.93881forward
CNT30334111Quercus lobataCynara cardunculus85.8780.5382.07881forward
CNT30114596Quercus lobataEutrema salsugineum86.6586.0682.45889forward

Expression of CNT30701241

Peptides detected in this lncRNA

>peptide 1 (58 aa)
KASLEHIRSHYTMASKLITDRQKPKSTNIEILKAMDSNTKSQPSKLRNHHGGEGQGAE*

>peptide 2 (40 aa)
MVSELSTSKVIVLPVKVLTKICIPPLSRSTRWRVDSFWML*

Sequence

>CNT30701241
TAAAGCAAGTTTAGAACATATTAGGAGCCATTATACAATGGCAAGTAAACTGATAACAGATAGACAAAAACCAAAAAGCACCAACATTGAAATACTCAAG
GCAATGGACTCGAACACAAAATCACAACCATCCAAGCTTAGAAACCACCACGGAGGCGAAGGACAAGGTGCAGAGTAGACTCCTTTTGGATATTGTAATC
AGCCAGAGTCCTTCCCTCTTCAAGCTGTTTGCCTGCAAAAATAAGCCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGAATCTTTGCTTTCACATTA
TCAATTGTATCAGAACTCTCAACCTCCAAAGTAATGGTCTTCCCTGTCAAGGTCTTAACAAAAATTTGCATTCCACCTCTAAGCCGGAGCACCAGGTGAA
GGGTGGATTCCTTTTGTATGTTGTAGTCGGCAAGTGTGCGACCATCTTCGAGTTGTTTACCGGCAAAGATCAACCTCTGCTGGTCTGGTGGGATACCCTC
CTTGTCTTGAATTTTGGCTTTGACGTTATCAATGGTGTCAGAGCTCTCAACTTCCAAAGTAATTGTTTTGCCAGTCAAGGTCTTAACAAAAATTTGCATT
CCACCTCTGAGCCGGAGCACCAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCTGCGAGGGTGCGACCATCTTCAAGCTGCTTGCCGGCAAAGATCA
ACCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGGATCTTAGCTTTAACATTATCTATAGTGTCTGAGCTTTCAACTTCCAAAGTTATGGTCTTCCC
AGTAAGGGTTTTAACAAAGATTTGCATACCACCACGGAGGCGGAGCACCAAGTGAAGTGTGGACTCCTTTTGGATGTTATAGTCTGCCAAAGTGCGACCA
TCTTCGAGTTGCTTACCGGCAAAGATCAACCTCTGCTGATCTGGTGGGATACCCTCCTTGTCTTGGATCTTAGCTTTGACATTATCAATAGTGTCTGAGC
TTTCGACCTCGAGGGTGATGGTCTTG