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Detailed information on CNT30701229


BLAST search results

BLAST vs Swiss-Prot:
sp|Q10HD0|CB23_ORYSJ, E-value = 6e-154

BLAST vs NONCODE:
NONSTUT002514, E-value = 1e-121

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512563Quercus lobataJuglans regia23.129.788.2449forward
CNT30373962Quercus lobataArabidopsis thaliana33.6458.6580.12654forward
CNT3070976Quercus lobataQuercus suber26.0399.6195.06506forward
CNT30378916Quercus lobataManihot esculenta33.9551.4486.67660forward
CNT30561790Quercus lobataActinidia chinensis26.975.6982.6523forward
CNT30311404Quercus lobataCamelina sativa33.6499.5479.36654forward
CNT3077068Quercus lobataBrassica juncea33.1363.4579.66644forward
CNT30264606Quercus lobataBrassica rapa27.6262.6680.07537forward
CNT30612591Quercus lobataArabis alpina32.6679.5779.53635forward
CNT30648173Quercus lobataRosa chinensis34.2638.3484.23666forward
CNT30360562Quercus lobataLactuca sativa33.3371.1381.02648forward
CNT30410959Quercus lobataPapaver somniferum30.7167.1582.08597forward
CNT3022417Quercus lobataPopulus trichocarpa7.8759.5390.85153forward
CNT30326027Quercus lobataAsparagus officinalis17.5459.9381.82341forward
CNT30114814Quercus lobataEutrema salsugineum33.4478.8879.08650forward

Expression of CNT30701229

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MLQDHQPVQVGQRRHQGKWGQVLHRVVLHQLCILQ*

>peptide 2 (35 aa)
MENIANLPFFSSFTFNSANASGSSASPSGSKAPPG*

>peptide 3 (34 aa)
MNEVWVAKIIKTTFRENLCTSLEPNCFTKLDTIL*

>peptide 4 (29 aa)
MAHRLWITSSSRFLANVSGSADNPAVSQP*

>peptide 5 (30 aa)
MMEFAQRMVPSTLGGLGHTCLICHIYRLIM*

>peptide 6 (31 aa)
MVKQVLNWTLSSNNSLNKETKHGEHCQPPIL*

>peptide 7 (38 aa)
LYFRSDTLISSLKKSSLWYHQYNIDEHSKREVEHKQED*

>peptide 8 (36 aa)
MQIVGWWKLPWFSTLSFFYVFFLCTYVEKGQGIERC*

>peptide 9 (65 aa)
MLINKKLRLLPNALWSTLYCAPHGNTATAKAANLTDEVIVLLQSGVGVAGKCRSLDGGSCHGLVR*

>peptide 10 (62 aa)
MTSAIDVLEIDNIFRNNDTLGSWILIQKMLGTQKISQLLPQLVTWIVVNGGCQMVSPRFHHS*

>peptide 11 (51 aa)
MLCGALFTVRLMVTRPPPKPPTLRMKSLYCFKAVWVWPANADRWMVEVAMV*

>peptide 12 (47 aa)
MDSCEWWMSNGESTLPPLITRHVTSCCKNCEIFCILNNAFFIIEVID*

Sequence

>CNT30701229
TTGTACTTTAGAAGTGATACATTAATATCTAGTTTGAAGAAAAGCAGTTTGTGGTATCATCAATACAATATAGATGAACACAGCAAGAGAGAAGTTGAAC
ACAAGCAAGAAGATTGATGAGTAAAGTTACAGTAGAACATTTAAGTTTCTTCATTTTCCAGGGACAAAGTTAGTGGCGTAGGCCCATGCATTGTTGGCGA
CTGGGTCAGCAACATGGTCAAACAGGTTCTCAATTGGACCCTTTCCAGTAACAATAGCCTGAACAAAGAAACCAAACATGGAGAACATTGCCAACCTCCC
ATTCTTTAGTTCCTTCACCTTCAATTCTGCGAATGCTTCAGGATCATCAGCCAGTCCAAGTGGGTCAAAGGCGCCACCAGGGTAAATGGGGTCAAGTCCT
TCACCGAGTGGTCCTCCACCAACTCTGTATCCTTCAATGAAACCCATAAGCACAACTTGAACAGCCCAGATTGCTAAGATGCTTTGTGCATGAATGAGGT
TTGGGTTGCCAAGATAATCAAGACCACCTTCAGAGAAAATCTGTGCACCAGCCTTGAACCAAACTGCTTCACCAAACTTGACACCATTCTTTGAAAGGAC
TTCAGGGAACACACAGCCCAAAGCTCCAAGCATGGCCCATCGGCTGTGGATCACCTCCAGCTCACGGTTCCTAGCAAATGTCTCAGGGTCTGCGGATAAT
CCAGCAGTGTCCCAGCCATAGTCACCAGGGAATTCACCAGTAAGGTATGATGGAGTTTGCTCAGAGAATGGTCCCAAGTACTTTGGGCGGTCTGGGCCAT
ACCTGTTTAATTTGTCACATTTACAGGTTAATTATGTGAGTTTGTAGTTTAACATAAGGGGTATGGAATTAAAAAGTTTTGATATGAATTTCCATGATAA
TAATTTCCTTCTCGAGTTCATAAGTTGAACTAAAACTGGTTGTTAAAAGTTTCTTTCAACATGATTGTATAATAGTTTTTGTTTTAGCTAAGACTATTAT
GAGTCCACCAATCAGACTATTTTGATTTATAAATAATTTGGTGATAGTAGTGGAGTTTGAAGGAATTTACTATTTCATGATGTTTAATGCCAACATAGGT
AAGTCGGGATGACTTCAGCAATTGATGTATTAGAAATAGATAACATATTCAGAAATAATGATACTCTTGGAAGTTGGATTTTAATTCAGAAAATGCTAGG
AACACAAAAAATCTCACAACTATTGCCACAACTTGTCACATGGATAGTTGTGAATGGTGGATGTCAAATGGTGAGTCCACGCTTCCACCACTCATAACTC
GTCACGTGACGAGTTGTTGTAAAAATTGTGAAATTTTTTGTATCTTGAACAATGCATTCTTCATTATAGAAGTAATTGATTAAAACAATTGTTGTTTTGT
TTTGTTTTGTTTTGTCTTTTGATCTGTGAATTGAATGAAAATATAAACACGCTGCATTAACGTGTAAAAAGAAAGTTTGGCCTCTAATGTTGCCCACCTC
CTAATTTACATTTTAAGGAAACTTTGTTCCTTTTGGCTTTTGCAAGTGTTTCTTTACTCTAAAATTGATGAGCTTTAAAAACAGTGTTTAATTAATATGG
GTACTAATTTTTAATTAATGTGAATGACTTACTAATTCAGCAGGAAAAATAAAGACATAATAATAATATATATTAATGCTAATTAATAAGAAATTAAGGT
TGTTACCAAATGCTTTGTGGAGCACTCTTTACTGTGCGCCTCATGGTAACACGGCCACCGCCAAAGCCGCCAACCTTACGGATGAAGTCATTGTACTGCT
TCAAAGCGGTGTGGGTGTGGCCGGCAAATGCAGATCGTTGGATGGTGGAAGTTGCCATGGTTTAGTACGCTAAGCTTCTTCTATGTGTTTTTTTTGTGTA
CATATGTTGAAAAGGGTCAGGGGATCGAGAGATGTTAATGTTAT