Detailed information on CNT30701196


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 2e-159

BLAST vs NONCODE:
NONMEST001181, E-value = 5e-137

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30727227Quercus lobataCorchorus capsularis78.8460.3185.57693forward
CNT3069553Quercus lobataQuercus suber81.9199.5998.06720forward
CNT30381217Quercus lobataManihot esculenta78.1675.4985.74687forward
CNT30495036Quercus lobataOlea europaea76.9160.5282.54676forward
CNT3045767Quercus lobataPrunus dulcis78.7347.1485.55692forward
CNT30635861Quercus lobataCapsicum annuum78.1637.3284.43687forward
CNT3096790Quercus lobataSolanum tuberosum74.6373.0585.37656forward
CNT30605497Quercus lobataGossypium raimondii78.2790.7784.3688forward
CNT30214147Quercus lobataHelianthus annuus77.784.9582.58683forward
CNT30153579Quercus lobataPrunus persica78.7343.6983.82692forward
CNT3032610Quercus lobataTheobroma cacao81.5788.6382.57717forward
CNT30120072Quercus lobataCitrus clementina78.2759.1684.88688forward

Expression of CNT30701196

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MASKLITDRQKPKSTNIEILKAMDSNTKSQPSKLRNHHGGEGQGAE*

>peptide 2 (40 aa)
MVSELSTSKVMVLPVKVFTKICIPPRSRSTRWRVDSFWML*

>peptide 3 (30 aa)
MVFPVKVLTKICIPPLSRSTRWRVDSFWIL*

Sequence

>CNT30701196
TTTAAGATACCACGACCATAACCAAACAACACTAAATTAAAGCAAGTTTAGAACATATTAGGAGCCATTATACAATGGCAAGTAAACTGATAACAGATAG
ACAAAAACCAAAAAGCACCAACATTGAAATACTCAAGGCAATGGACTCGAACACAAAATCACAACCATCCAAGCTTAGAAACCACCACGGAGGCGAAGGA
CAAGGTGCAGAGTAGACTCCTTTTGGATATTGTAATCAGCCAGAGTCCTTCCCTCTTCAAGCTGTTTGCCTGCAAAAATAAGCCTCTGCTGGTCTGGGGG
AATTCCCTCCTTGTCCTGAATCTTTGCTTTCACATTATCAATTGTATCAGAACTCTCAACCTCCAAAGTAATGGTCTTCCCTGTCAAGGTCTTAACAAAA
ATTTGCATTCCACCTCTAAGCCGGAGCACCAGGTGGAGGGTGGATTCCTTTTGGATATTGTAGTCGGCTAGGGTCCGACCATCTTCAAGCTGCTTGCCGG
CAAAGATCAACCTCTGCTGGTCTGGTGGGATGCCCTCCTTGTCTTGAATTTTGGCTTTGACATTATCGATGGTGTCAGAGCTCTCAACTTCCAAAGTAAT
GGTTTTACCGGTCAAGGTCTTCACAAAAATTTGCATTCCACCTCGAAGCCGGAGCACCAGGTGGAGGGTGGATTCCTTTTGGATGTTGTAGTCTGCAAGG
GTGCGACCATCTTCGAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGGATCTTAGCTTTGACATTGTCAATGG
TGTCTGAGCTTTCCACCTCAAGGGTGATGGTCTTGCCAGTGAGTGTCTTAACAAAGATCTGCATCTGTTTCATTCAAAA