CANTATAdb - search

Detailed information on CNT30701150

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30717318	Quercus lobata	Malus domestica golden	9.6	32.71	90	70	reverse complement

Expression of CNT30701150

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MGFDRVTPRGQQRVENHLLRKMFSQVQMLRLLIKVLSRKVLITQLLKASLFGIRVCRQSRCF*

Sequence

>CNT30701150
GTTTTGACTGACTGAGTTTACTTTGTTTCCTTGTTTTCTGATTTTTTCTTGGTGCTGATTTAGATGGAGGTATGTTAAATTTATCTTCTTTTTTGGTTTA
TTTATTTATTATTGAAGTGGCTGGTTATTAAAATTTCTATTTTTTTATGTGTTTGGGTTTATTGTTTTCATTGTTATAAGAGTGTTTGGATTTTGAATAT
TGGGGTTTTGCAAATTATGGGATTTGATAGGGTGACACCAAGGGGTCAGCAAAGGGTGGAGAATCATCTGCTAAGAAAGATGTTCAGCCAAGTCCAAATG
CTCAGATTGCTCATCAAGGTTCTTTCTCGCAAGGTGTTAATTACGCAACTTCTCAAAGCCAGTCTTTTTGGAATTAGGGTTTGCCGCCAAAGTAGGTGCT
TTTAAATCGGAATCCCATAATTGAAATTGTCTCAGGCACAACATCTGATGATTCCTATGCAAGGCTCAGATTAGATTTCTGCTCGATCATTACTAATTCC
ACCATTTGGCGTCCTGCTTGAGGAGATCTTTTTCAGTGCCCACAACAAATATTTATTCTTATGTGAACACTGACATTTTAGGGTCTTTTGGGCACTATTG
TCCAATCCATATGTATTCTAGGTATGGTTTGTATGTTTAGGGGTGTCTTTCGATTAAAATATTTATTTTAAGAAAACACTGTAAATCTTGGGTCCTGTGA
TTTGTTAACTGGGTGTTTTGGCAATATGT