CANTATAdb - search

Detailed information on CNT30700914

BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-101

BLAST vs NONCODE:
NONGMAT000502, E-value = 1e-59

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30729080	Quercus lobata	Corchorus capsularis	73.79	57.85	84.16	442	forward
CNT30541492	Quercus lobata	Brassica napus	71.45	34.35	85.75	428	forward
CNT3033584	Quercus lobata	Theobroma cacao	76.46	66.86	85.15	458	forward
CNT30120665	Quercus lobata	Citrus clementina	76.29	40.95	85.12	457	forward

Expression of CNT30700914

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MVSELSTSNVMVLPVRVFTKICIFLRERFAREKFARF*

>peptide 2 (60 aa)
LSYNNYHYTYSENHILNTLNLQRKSFTGHREDEEQGEEWTPFECCNQREYALPPIASQQR*

Sequence

>CNT30700914
TGTTAAGCTATAACAACTACCATTACACTTATTCAGAAAACCACATTTTGAACACATTAAACCTTCAGAGAAAATCTTTTACTGGCCACCGCGAAGACGA
AGAACAAGGTGAAGAGTGGACTCCTTTTGAATGTTGTAATCAGCGAGAGTACGCCCTTCCTCCAATTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCCG
GAGGAATTCCCTCCTTATCTTGAATCTTTGCCTTCACATTATCGATCGTATCGGAGCTCTCCACCTCCAAAGTGATCGTCTTCCCGGTTAGGGTTTTCAC
AAAGATCTGCATGCCACCACGGAGCCTCAACACAAGGTGGAGCGTAGACTCTTTCTGGATATTGTAATCGGCGAGGGTACGACCTTCCTCCAATTGCTTC
CCGGCGAAGATGAGCCTCTGCTGGTCCGGCGGAATCCCTTCCTTGTCCTGAATCTTGGCCTTAACGTTATCGATGGTGTCGGAGCTTTCCACCTCCAACG
TGATGGTCTTGCCGGTCAGAGTTTTCACGAAGATCTGCATCTTTCTGAGAGAGAGATTTGCGAGAGAGAAATTTGCGAGATTTTGAGATTTCGAGAGAT