Detailed information on CNT30700582


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7XT99|AKR2_ORYSJ, E-value = 6e-58

BLAST vs NONCODE:
NONPOPT001153, E-value = 9e-26

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3070513Quercus lobataQuercus suber99.2558.1594.7396forward
CNT30450529Quercus lobataSaccharum spontaneum24.5622.7984.6998forward
CNT30152051Quercus lobataPrunus persica85.2143.3185.29340forward
CNT30704154Quercus lobataPrunus avium84.9642.6484.37339forward
CNT3022456Quercus lobataPopulus trichocarpa57.1432.7682.02228forward

Expression of CNT30700582

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MKKVVGFQNPSKLQTHSYICHPSRHPQQQMIQVQPFLLVSISQTELQCFG*

Sequence

>CNT30700582
CGCATGACAAAAGCTCAAGAAACTCACGTACATATTGATACATAGAAATAGACTTGTGCTTATGTAGCTTTCCATGAAGAAAGTGGTGGGGTTTCAGAAT
CCTTCCAAGTTGCAAACTCATTCATATATCTGTCACCCTTCACGACATCCTCAGCAGCAAATGATTCAAGTTCAACCATTTCTTCTGGTGTCAATTTCAC
AGACAGAGCTCCAATGTTTTGGTTAAAGTTTTCAATCTTGGTGGTTCCAGGTATGGGACACACATCCTTCCCATGGTGATGAACCCAAGCCAGAGCTAGC
TGCGATGGGGTGCAGCCCTTCCTTGCTGCCATTTCATTAACACGCTCAAATATGGTTTTGTTATGCTCCAGATTTTCAGGTTGGAACCTGGGTAGGAAC