Detailed information on CNT30700549


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LZI2|UXS2_ARATH, E-value = 1e-81

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3020608Quercus lobataCitrullus lanatus97.4787.382.34385forward
CNT30637312Quercus lobataCapsicum annuum44.5640.9380.68176forward
CNT3098150Quercus lobataSolanum tuberosum64.351.8482.68254forward
CNT30177095Quercus lobataSecale cereale43.812.4885.55173forward
CNT30508626Quercus lobataSolanum lycopersicum56.9666.5784.44225forward
CNT30131528Quercus lobataLolium perenne63.854.6682.94252forward
CNT30231964Quercus lobataAnanas comosus44.8114.5182.49177forward
CNT30718631Quercus lobataMalus domestica golden97.9767.4283.98387forward
CNT30411763Quercus lobataPapaver somniferum57.7220.2383.33228forward
CNT30570592Quercus lobataVitis vinifera61.5275.2386.83243forward
CNT30645151Quercus lobataCannabis sativa10041.4582.03395forward
CNT30325711Quercus lobataAsparagus officinalis42.5352.6680.36168forward
CNT30726386Quercus lobataLupinus angustifolius56.9625.0382.67225forward
CNT3050773Quercus lobataCucumis sativus96.267.6281.58380forward

Expression of CNT30700549

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MSSNLGLPKCCTRLSFLPVKKLSTTITVSPLLIRRSTRWLPTNPAP

>peptide 2 (67 aa)
TNGVDIAPVGFNLWVLQRITVHLTGARYQKPCTDSFCQSKHVHCTHHIGYDGLDRVVLVMNRRSRAS*

Sequence

>CNT30700549
ACCAATGGGGTTGACATTGCCCCAGTAGGTTTCAACCTGTGGGTGTTGCAGAGGATCACCGTACACCTCACTGGTGCTCGTTACCAAAAACCTTGCACCG
ACTCTTTTTGCCAGTCCAAGCATGTTCATTGTACCCACCACATTGGATATGATGGTCTTGACCGGGTTGTACTTGTAATGAACCGGAGAAGCAGGGCAAG
CTAGATGGTAGATCTGATCAACTTCCAATAGAATCGGCTCAACGACGTCGTGTCTTATGAGCTCAAACCTCGGACTCCCAAAGTGCTGTACCAGGTTGTC
CTTCCTCCCCGTGAAGAAGCTATCAACGACGATCACAGTGTCTCCTCTTTTGATCAGACGGTCCACAAGGTGGCTCCCCACGAACCCGGCCCCAC