CANTATAdb - search

Detailed information on CNT30699961

BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG83|UBIQP_HORVU, E-value = 3e-75

BLAST vs NONCODE:
NONGMAT000502, E-value = 4e-58

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30529251	Quercus lobata	Eucalyptus grandis	43.29	51.63	89.52	458	forward
CNT30316048	Quercus lobata	Corylus avellana	43.38	35.97	90.2	459	forward
CNT30616366	Quercus lobata	Sesamum indicum	40.26	50.12	88.03	426	forward
CNT30506303	Quercus lobata	Nicotiana attenuata	43.38	56.18	88.24	459	forward
CNT30562220	Quercus lobata	Actinidia chinensis	43.1	56.16	87.94	456	forward
CNT30127456	Quercus lobata	Corymbia citriodora	43.29	57.68	89.52	458	forward
CNT30620193	Quercus lobata	Cajanus cajan	43.38	71.5	87.36	459	forward
CNT30153779	Quercus lobata	Prunus persica	43.19	46.92	86.65	457	forward
CNT30120625	Quercus lobata	Citrus clementina	43.48	42.12	88.91	460	forward

Expression of CNT30699961

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MPSLSWILAFTLSMVSELSTSKVMVLPVRVLTKICMPPRRRRTRWRVDSFWML*

>peptide 2 (38 aa)
MTFSRYDRSIICLCFSPALLWLKLKYTNINNQIPRISV*

>peptide 3 (37 aa)
KQLNRTINHKTTIFNHKAGFFHSSESTTTETEDKVKC*

>peptide 4 (33 aa)
MVSELSTSRVMVLPVRVFTKICIYQKQTPFKIS*

Sequence

>CNT30699961
AAACAATTAAACAGAACCATAAATCATAAAACAACAATTTTCAATCATAAAGCAGGGTTTTTTCACTCCTCAGAAAGCACCACCACGGAGACGGAGGACA
AGGTGAAGTGTTGACTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGCCCGTCCTCGAGCTGCTTCCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGGA
TGCCCTCCTTGTCCTGGATTTTAGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCGACCTCCAAGGTGATGGTTTTGCCAGTGAGGGTCTTGACGAAGAT
CTGCATGCCACCGCGGAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGGTGCGGCCGTCCTCCAGTTGCTTTCCGGC
GAAGATCAGCCTTTGCTGGTCTGGGGGGATTCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCTGAGCTCTCGACCTCGAGAGTGATG
GTCTTGCCGGTCAGGGTTTTCACGAAGATTTGCATCTATCAAAAACAAACGCCGTTTAAGATTTCATGAATTTCCATATAAAATTTTCCAGATTCAACAG
ATCAGATCAGATAAATCAAAACCAATAAATAGATACAAATATAGATTTTTTTTTTTTTGGTTTCATTTTCCATACAGATCTTACGAAATAATAAATCTTT
CATTGTATTGAAAAAATAAATTTGATATAAATCCTCCACTATAATCAATTTTTTTTAGTACAGATCTGACCAAATCAATTGGATTTGAGCAAAAAATAGC
ACAAATTTCAATATGACTTTTTCCAGATATGATAGATCTATAATCTGTCTATGCTTTTCACCTGCTTTATTATGGCTTAAGCTAAAGTACACTAATATAA
ATAATCAGATTCCACGAATTTCCGTATAAATCACAGAGATCTATAATTCCTTTGATGATTATTTAGGTTTGGATTTCCCAAATACTATAGATATTTACTA
TGCTATGCTTCAAATCAAGAAGAGAAATCAAAAAAGAGGACTGGAATAATAAATAAAA