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Detailed information on CNT30699116


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30407222Quercus lobataBeta vulgaris6.6858.4184125reverse complement
CNT30129950Quercus lobataCorymbia citriodora11.1141.9490.38208forward
CNT30715882Quercus lobataMalus domestica golden6.2532.6888.03117reverse complement
CNT30154455Quercus lobataPrunus persica11.7529.3390.45220forward

Expression of CNT30699116

Peptides detected in this lncRNA

>peptide 1 (63 aa)
SANCSRIAPAPVDISRFRNASKPWVVKKSGMLYFQDWISYSNEPRNRKKVGFLAMGLAKEKFG*

>peptide 2 (32 aa)
MEASLGYVFCCLFHSESTNPVSCSPKNPGLSP*

>peptide 3 (35 aa)
MGYWACQFDIAHLVSSYPRIHELDSLEMQNNKETP*

Sequence

>CNT30699116
ATCGGCTAATTGTTCTCGTATAGCACCTGCTCCAGTAGACATTTCTCGATTTCGAAATGCATCGAAGCCTTGGGTAGTAAAGAAAAGTGGGATGCTGTAT
TTCCAGGATTGGATTTCATATTCGAATGAACCTCGTAATCGTAAGAAAGTAGGTTTTTTAGCTATGGGCCTAGCAAAAGAAAAATTTGGGTAGGATCCTA
TAGGATATCCCCCTTCAAAATTGGACGTGAAAGTTTCCTTTCATCCGGCTCAAGTAGTTACACCAACTAAAGATAAAGAAAGGAGTTTCCACTTTATTTT
CTTTATCTATAAAACGGAACCCCCCCCCCCCCAAAAAAAAGAAAAAGAAAAGATCTACTCTTTACTCAAGTTTCCAATTTAGACCAAGCAACATTTCATT
AATTCATTTTTTTTTTCTTTTTGTAGATTTCGATTTTATTTTATGAATTTTTTATTCAATTAGAAATTACGACGTAAAATCAATGAAATGTAAAATTCTT
GAGTAGTCTACGTCCCTTCGAATGAGAGATACCTTTACTTAATTCTTAATTTCATTCAATTAAAGTAAAGAAGTACCTTGGAATTTATAAGGGATTTACT
TGTCTATGTATCATTACATTCGATCTTTTAGGTCCCTACTTTGCCTCGACGGTTATGCCACGATGTCCTTAAAGCCTCTATGCGATGGATAGGCTCCTGC
AACCATGACATGACAGAATTTGCTTATTTTAATAAACATAATTTCATTTCTTTATAAAGTAAAAGAAAGGGAGTGGTTAATTCCACAAAAGAAGTCTTTT
TTTTTTTTTTTTCACGAGGTAGAACTATAAATTCCTATTTATTTGTTACTGAAGAGCCCGTAGACCAATTCCCCCTTTTATTTGGGAGTATTGAATACAC
CCATAATTCTGAGCTTCATGTTCTTCCTACCAAGAGACATGTCAGATCCAGGGCATACCAATTCACTTGAATGGTATGACAGTTTCTCATTCTGAATCTG
TAAAATCAGAGTTTTGATCAAATCACACATCGCAGTATACCAGTCCTTCTAATTCTTTAAGAGGTTTATCTAAAAGATTCGCGATATAACTAGGAAGACG
CTTCAAATACCACACATGGGTTACTGGGCATGCCAGTTTGATATAGCCCATTTGGTATCTTCGTATCCGAGAATCCACGAATTGGACTCCTTGGAGATGC
AAAATAACAAAGAAACTCCATAGCTTGGTTCTCAATCTCCAAAGACAGCTTCGGGTTTTGATCTTTTCTGTTGAAAACAAAATTGTTTCTGCTCTTCCAC
ACATTCCAAACAGCAAAAAGAAAGCTAGTACTCCATGGAGGCTTCCCTTGGATATGTCTTTTGTTGTCTTTTCCATTCAGAATCAACCAATCCTGTAAGT
TGCTCACCCAAAAACCCCGGTCTGTCTCCTTAACTCCTAACTGTCTCCAAATATCCTTAACTCTTCGACAGTCCCTCAAAGCATGTAGAATTGATTCCGG
CTCCCTTTGGCACATGGGACACAAATCCTCCTCAATTACTCTTCTCCTTACAAGACATTCTTTGACCCCAATACTGCCATGAAAACACATCCACAAAAAG
GTTTTAATATGAGGCAGTGTCTTTAATTTCCAAATCCAACCAAAACTACTAGTAGTCACCTCAGAATCCTCATCCGTAGCAATTCCATAGGCACTCTTTA
AGTCAAAGGTACCTCTCGGGTTTCCCAACCAAGAAATCCTATCCCTTCCTCTGCTAGTGATTGATATAGGAGTGGCCTGAATCATTGCTCTAACATCTGA
AGGAAGCTCAAAAGGAATTCGGTTCCAAGCCCACCCCGTGTCTGATAACACATCCTTAATTTCCAAAAGATT