Detailed information on CNT30699090


BLAST search results

BLAST vs Swiss-Prot:
sp|P93604|LRK10_WHEAT, E-value = 2e-60

BLAST vs NONCODE:
NONVVIT001259, E-value = 5e-46

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315070Quercus lobataCorylus avellana42.7520.8286.31168forward
CNT3069516Quercus lobataQuercus suber43.5154.2985.38171forward
CNT3090659Quercus lobataSolanum tuberosum58.0240.7979.82228forward
CNT30713283Quercus lobataMalus domestica golden64.6320.5781.89254forward
CNT30573413Quercus lobataVitis vinifera66.1615.2283.08260forward
CNT30707309Quercus lobataPrunus avium63.8732.4380.08251forward
CNT3026124Quercus lobataPopulus trichocarpa62.8535.5479.35247forward

Expression of CNT30699090

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MEVTNSFGYAQSNILKLLPTKYMTLTINREYVLI*

Sequence

>CNT30699090
CATCTAATTTATGTGATACAGTCCCAAAATTCCTAGATAAAACCTCAGGTGCAATATAGCCCATTGTTCCCCTTGCAGCAGTCATAGAAACCACACTTTT
TTCCTTGGAACACAACTTGGCAAGACCAAAATCAGAGATCTTGGGGTTAAAGTTTTGGTCTAGCAAAATATTATGAGGTTTGATATCAAAATGTAGAATT
TGTTGGTCACACCCTTGATGGAGGTAACCAATTCCTTTGGCTATGCCCAAAGCAATATCTTGAAGCTTCTCCCAACCAAGTATATGACTCTTACCATTAA
CAGAGAATATGTACTTATCTAGAGATTTGTTTGGTAAATATTCATAAATGAGAGCTCTCCGAAATCCATCAGCACAATAGCCTACCAAGCGAG