Detailed information on CNT30699079


BLAST search results

BLAST vs Swiss-Prot:
sp|Q09X26|RPOC1_MORIN, E-value = 2e-75

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30202316Quercus lobataPisum sativum94.265.3990.46325forward
CNT3082978Quercus lobataBrassica juncea53.622.2892.43185forward
CNT30100313Quercus lobataOryza rufipogon34.4952.1989.08119forward

Expression of CNT30699079

Peptides detected in this lncRNA

>peptide 1 (80 aa)
SANCSRIAPAPVDISRFRNASKPWVVKKSGMLYFQDWISYSNEPRNRKKVGFLAMGLAKEKSQYTSPSNSLRGLSKRFAI*

Sequence

>CNT30699079
ATCGGCTAATTGTTCTCGTATAGCACCTGCTCCAGTAGACATTTCTCGATTTCGAAATGCATCGAAGCCTTGGGTAGTAAAGAAAAGTGGGATGCTGTAT
TTCCAGGATTGGATTTCATATTCGAATGAACCTCGTAATCGTAAGAAAGTAGGTTTTTTAGCTATGGGCCTAGCAAAAGAAAAATCGCAGTATACCAGTC
CTTCTAATTCTTTAAGAGGTTTATCTAAAAGATTCGCGATATAACTAGGAAGACGCTTCAAATACCACACATGGGTTACTGGGCATGCCAGTTTGATATA
GCCCATTTGGTATCTTCGTATCCGAGAATCCACGAATTGGACTCC