Detailed information on CNT30698491


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 3e-167

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-99

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515731Quercus lobataJuglans regia75.9486.9385.1745forward
CNT30381863Quercus lobataManihot esculenta62.5964.8483.22614forward
CNT30406245Quercus lobataBeta vulgaris61.3792.3382.39602forward
CNT30200107Quercus lobataPisum sativum66.0673.1483.02648forward
CNT30488054Quercus lobataOlea europaea66.9776.4882.5657forward
CNT30572855Quercus lobataVitis vinifera65.6568.5884.01644forward
CNT30330420Quercus lobataDioscorea rotundata65.9538.2483.46647forward

Expression of CNT30698491

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSRVMVFPVRVLTKICIPPRSLRTK*

>peptide 2 (33 aa)
AHLFMENTVHNQITLAENSNHDRSTKTTIKKST*

>peptide 3 (94 aa)
MLNQLNMTTTEAENKMQGALFLDIVVCECSTILKLLSRKDEPLLIRWDPLLVLNLCLHIINGIRTLHLKCDCLARQCLHKDLHTTTKAENKMEC*

>peptide 4 (90 aa)
MKSRLFLNVIVSQSPAIFKLFSSEYQPLLVWWNTFFILNFCLNIVNSIRALDLKSNSLASKSLYKDLHSTTEAEDQMQGGLFLDVVVGQCP

>peptide 5 (37 aa)
MVSELSTSSVIVLPVSVFTKICIPPRRRRTRWSVDSF*

Sequence

>CNT30698491
GCACATTTATTTATGGAAAACACTGTTCATAACCAAATAACATTGGCAGAAAATTCAAACCATGACAGGAGTACCAAAACAACCATTAAAAAATCAACCT
GAGAATTAAAGGGTTTATCATCCCCAAACATCAAACTGATAAACATACAGAGAATATAACACTGTTTATTAAATCTTCAGATTGAAACCCGACTTGATTG
TACCAATGTTGAACCAACTAAACATGACCACCACGGAGGCGGAGAACAAGATGCAGGGTGCTCTCTTTCTGGATATTGTAGTCTGCGAGTGTTCGACCAT
CCTCAAGCTGCTTTCCCGCAAAGATGAGCCTCTGCTGATCAGGTGGGATCCCCTCCTTGTCCTGAATCTTTGCCTTCACATTATCAATGGTATCAGAACT
CTCCACCTCAAGTGTGATTGTCTTGCCCGTCAGTGTCTTCACAAAGATCTGCATACCACCACGAAGGCGGAGAACAAGATGGAGTGTTGATTCCTTCTGA
ATATTGTAATCAGCCAGAGTGCGACCATCCTCAAGTTGTTTTCCAGCAAAGATGAGCCTCTGCTGATCCGGAGGAATCCCTTCCTTATCTTGAATCTTTG
CTTTAACATTATCTATGGTATCAGAGCTCTCCACCTCAAGGGTGATGGTCTTCCCAGTCAGAGTCTTAACAAAAATCTGCATTCCTCCACGAAGCCTGAG
AACCAAATGAAGAGTAGACTCTTTCTGAATGTTATAGTCAGCCAAAGTCCTGCCATCTTCAAGCTGTTTTCCAGCGAATATCAGCCTCTGTTGGTCTGGT
GGAATACCTTCTTTATCCTGAATTTTTGCCTTAACATTGTCAATAGTATCAGAGCTCTCGACCTCAAGAGTAATAGTCTTGCCAGTAAGAGTCTTTACAA
AGATTTGCATTCCACCACGGAGGCGGAGGACCAAATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGCCAATGTCCGAC