Detailed information on CNT30698389


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30500372Quercus lobataCoffea canephora60.4883.1691.23889reverse complement
CNT30619071Quercus lobataSesamum indicum53.61101.2990.74788reverse complement
CNT30283133Quercus lobataChenopodium quinoa47.6985.4990.58701reverse complement
CNT30730459Quercus lobataCorchorus capsularis64.0179.4894.05941reverse complement
CNT3072442Quercus lobataQuercus suber62.3152.7694.98916reverse complement
CNT30639035Quercus lobataCapsicum annuum64.0876.0992.46942reverse complement
CNT3089447Quercus lobataVigna radiata55.8577.0289.65821reverse complement
CNT30544396Quercus lobataBrassica napus64.0179.3491.5941forward
CNT30312280Quercus lobataCamelina sativa64.0845.292.57942forward
CNT30726571Quercus lobataLupinus angustifolius41.6370.5992.16612reverse complement
CNT30115258Quercus lobataEutrema salsugineum54.5675.8891.77802forward

Expression of CNT30698389

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MSDSLVRVSRRAEWGARRPMLGARRCRGTP*

>peptide 2 (36 aa)
MLSLEPFSEDQGRSAVQPSRGSRQSVSLRLTGLLAR*

>peptide 3 (34 aa)
MGSPQADARSAQMPRHAVRRALPTTIAATTSPRA*

>peptide 4 (42 aa)
SARLETRTKESDMCASQRASKPVRRKEADWRDPLEGCTADRP*

>peptide 5 (40 aa)
MQPQSGGKFRPRLNTGERPIANKYREGKMKRTLKRESKSA*

>peptide 6 (48 aa)
MEFTARLGLHSQTTRLADSASWCDRVRAPRGSHPLRRPLPGDLGPVRR*

Sequence

>CNT30698389
TTCGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGCCAGTAAACCCGTAAGGCGTAAGGAAGCTGATTGGCGGGATCCC
CTTGAGGGTTGCACCGCCGACAGACCTTGATCTTCTGAGAAGGGTTCGAGTGAGAGCATACCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGG
GGCGAAGCCAGAGGAAACTCTGGTGGACGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTC
TAGTAGCTGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTGCGGGCGTCCACCAGAGTTTCCTCTGGCT
TCGCCCCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGTATGCTGTCACTCGAACCCTTCTCAGAAGATCAAGGTCGGTCGGCGGTGCAACCC
TCAAGGGGATCCCGCCAATCAGTTTCCTTACGCCTTACGGGTTTACTGGCCCGTTGACTCGCACACATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGG
CCGAATGGGGAGCCCGCAGGCCGATGCTAGGAGCGCGCAGATGCCGAGGCACGCCGTGAGGCGCGCGCTGCCAACCACGATCGCGGCAACGACGTCTCCA
CGGGCATAACTACAGCCCGGCCTTGGGCCGCCGCCGAAATCCGCATCGGTCCACGCCCCGAGTCGATCGGCGGACCGGCTGTCGCCGTTCCACATCCGAC
CGGGGCGCATCGCCGGCCCCCATCCGCTTCCCACCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTT
GTTTGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGATGGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGCCGACAGCGCCTCGT
GGTGCGACAGGGTCCGGGCACCACGGGGCTCTCACCCTCTTCGGCGCCCCCTTCCAGGGGACTTGGGCCCGGTCCGCCGCTGAGGACGCTTCTCCAAACT
ACAATTCGGAGATGCCCGTGAGGGCGCCCGATTCTCAAGCTGGGCTGTTCCCGGTTCGCTCGCCGTTACTAGGGGAATCCTTGTAAGTTTCTTTTCCTCC
GCTTATTGATATGCTTAAACTCAGCGGGTAGTCCCGCCTGACCTGGGGGCGCCGGAGAGGGTGAGAGCCCCGTCGTGCCCGGACCCTGTCGCACCACGAG
GCGCTGTCGGCGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGCTAAATACGGGCGAGAGACCGATAGCAAACAAGTA
CCGCGAGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGC