Detailed information on CNT30698271


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535437Quercus lobataEucalyptus grandis48.2542.5880.92152forward
CNT30513856Quercus lobataJuglans regia47.347.681.88149forward
CNT30730253Quercus lobataCorchorus capsularis43.1729.8983.09136forward
CNT3070604Quercus lobataQuercus suber69.2150.8298.17218forward
CNT30629601Quercus lobataVigna unguiculata45.431.7183.22143forward
CNT3044720Quercus lobataPrunus dulcis33.0215.7887.5104forward
CNT30646760Quercus lobataRosa chinensis47.9436.0480.79151forward
CNT30355349Quercus lobataLactuca sativa35.2418.584.68111forward
CNT30704435Quercus lobataPrunus avium44.7621.3386.52141forward
CNT3024289Quercus lobataPopulus trichocarpa46.0329.5980.69145forward
CNT30176173Quercus lobataVigna angularis45.0846.5683.1142forward

Expression of CNT30698271

Peptides detected in this lncRNA

>peptide 1 (33 aa)
LALVPNHSQNCDVKEKKCGNELCNKSSVKGPLG*

Sequence

>CNT30698271
GTCTGGCTCTTGTACCCAATCACAGTCAAAACTGTGATGTAAAGGAAAAGAAGTGTGGCAATGAACTCTGCAATAAGAGCTCTGTAAAAGGACCACTGGG
TTAGCTCCTCAGGGTCGATCAAAGGAGCTGGAGGTGGGTCATGGTAGTCCTTAGCTGAGTACTCTCCTCCTTGCTCTGCAACTTCAACATCCTTTGTCAT
AGTGATCACTTAAGCTTAGAAATAGAAGTGAAAGAGAGTTTTAAAAGGGAAAGAAGTTGAAGTGTGTTGTGCTGTGATTTGTGGATGGAGGAGTGAGTAC
AAAGGTCTGTTTATG