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Detailed information on CNT30698134


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39654|PSAL_CUCSA, E-value = 9e-73

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672414Quercus lobataSetaria viridis7.6223.6782.39142forward
CNT30520781Quercus lobataSetaria italica7.6222.0582.39142forward
CNT30533721Quercus lobataEucalyptus grandis1129.3783.41205forward
CNT30316049Quercus lobataCorylus avellana9.827591.8183forward
CNT30516978Quercus lobataJuglans regia18.450.2988.34343forward
CNT30376279Quercus lobataArabidopsis thaliana7.7824.3383.45145forward
CNT3021623Quercus lobataCitrullus lanatus22.4830.8579419forward
CNT30730016Quercus lobataCorchorus capsularis1439.4379.69261forward
CNT30507461Quercus lobataNicotiana attenuata7.3537.8583.94137forward
CNT30712228Quercus lobataGlycine max13.6850.183.92255forward
CNT3042792Quercus lobataPrunus dulcis8.140.9290.07151forward
CNT30635301Quercus lobataCapsicum annuum10.8951.1384.73203forward
CNT3094038Quercus lobataSolanum tuberosum14.0642.0580.53262forward
CNT30292897Quercus lobataTriticum aestivum7.6224.1180.28142forward
CNT30564215Quercus lobataActinidia chinensis4.7733.7188.7689forward
CNT3084834Quercus lobataVigna radiata6.0129.0984.82112forward
CNT30172563Quercus lobataTrifolium pratense12.1833.4380.62227forward
CNT3075006Quercus lobataBrassica juncea7.6731.7881.82143forward
CNT30614377Quercus lobataArabis alpina5.5339.7783.5103forward
CNT30454500Quercus lobataSaccharum spontaneum7.4638.482.01139forward
CNT30135064Quercus lobataLolium perenne9.0729.680.47169forward
CNT304795Quercus lobataZea mays7.6231.4282.39142forward
CNT30720963Quercus lobataTriticum spelta7.6225.4980.28142forward
CNT30344813Quercus lobataEragrostis tef7.7827.7282.76145forward
CNT30154501Quercus lobataPrunus persica6.4938.7885.12121forward
CNT30644515Quercus lobataCannabis sativa20.8767.383.8389forward
CNT3027985Quercus lobataTheobroma cacao13.7347.1584.38256forward
CNT3037832Quercus lobataCucumis melo15.534.3278.89289forward
CNT30104607Quercus lobataOryza rufipogon5.6329.2583.81105forward
CNT30578384Quercus lobataOryza barthii6.0628.8384.96113forward
CNT30557050Quercus lobataPanicum hallii7.6237.3782.39142forward
CNT30726870Quercus lobataLupinus angustifolius11.912282.43222forward
CNT3049017Quercus lobataCucumis sativus15.529.4678.89289forward

Expression of CNT30698134

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MVFLIQTIDDNDDNNNNNNNKTTTTTIVSYLSSFLF*

>peptide 2 (56 aa)
MVREWSLLEGKTLRGEPERPLGETKALVIGEVKLDLSWLAIGEAVAMALLSEEKQV*

>peptide 3 (40 aa)
MDYIRYSPSLLMISILGWMQDLKRWFETLLTELVNTITQS*

>peptide 4 (44 aa)
MSMLKNPTSTPPLSTYLKHKQKQKQKIQMCCSLYLLILNLIISR*

>peptide 5 (56 aa)
MYMHIHMIYNSREISKIIYLFRLDGFDGEGMESPRRQDFEGRAREAFGRDQSSCDW*

>peptide 6 (69 aa)
MPPKKNPPVNLAHPSAVCNWSGSFFRPVRVNEGAVDGSPSLKDAMPYIVKQRLSITTSPAAARDPAPPA*

Sequence

>CNT30698134
CATTAAGAGAAAACATAGATTAACAAAAAATCACTTGAAGTAGTAAGGAAGGTTCAGGACATAGAGGAGGAAGTAGGCCCAAGTGACACCAGAAATGCCA
CCGAAGAAGAATCCGCCAGTGAACTTGGCCCATCCGTCTGCAGTTTGCAACTGGTCGGGCTCCTTCTTCCGGCCAGTTAGGGTTAATGAGGGGGCAGTGG
ATGGCTCTCCTTCATTAAAGGATGCAATGCCATACATTGTCAAGCAAAGGCTAAGTATAACAACAAGTCCAGCAGCAGCCAGAGACCCGGCTCCCCCAGC
ATAGGGGGTGTTTCTCAGAGGCCCAGTTTTGACAAAGGGTCCAACAAGGAGAAACCCATGGGCAAGGCCAACTTCAATTCCCCTTAGAAGTGGGCTGACT
GCAGTCCGATAGGCCGGAAGGTTGGAGAGGTACCATGCAATCAATGGGCTTCCAATGAATGGGTCACCATTGATGGGCTGAATAACTTGGAAAGTTGGCT
GCCAAAAAAAAAAAAAGAAGAAGTTATATCTAAGTAGGATTAAGTAGGACTTATAAAGGAAACATTGATGGGCTGAATAACTTGGAAAGTTGGCTGCCAA
AAAAAAAAAAAAAAAAGAAGTTATATCTAAGTAGGATTAAGTAGGACTTATAAAGGAAACATTAGGTTATAACTTATATCTATACAGAATCAGGTTATAT
CTAAGTTCTATTAGGGTTTTTTTCTTTTTTCTTTTTTTCAAGAGAGTACGAAAGTAATAATTAAGTTGGACCTAAAAGACTCGAGTACTTGTCCAAGAGT
GGAATCCGGAAAAGAAAAAAAAAAAAAGCAAACTACTTACGAAAAATAGAAGACCAGTTCTCCTAGTTGCATATCAGTAGCTAGTCCTAGGCCCTAATTA
TTATGTCTGTAAAGGTTTTACATCTAAATAAGCGATAGCCAGTGGTAATGTCTCATGTCTATGCTTAAAAACCCAACTTCCACTCCTCCACTATCTACTT
ACCTCAAACACAAACAAAAACAAAAACAAAAAATCCAAATGTGTTGTAGCTTGTATCTCTTAATTTTAAATCTTATTATATCTAGGTGATAATATTATCA
CCTACAATTGAGATTATAATTTGGGAAGTGAGTGGATTCGTAAGCAAAACGCGTTTGACATAGTGGAAAAATACCAAACCACCACAAAGCTTTCTTCCAA
TTAAAATTGAACTCATGCTGTTATAAATATCCGATACATAAGATATATTCTCGAACTCAAAAATTAACTCCTTTCAAGTCATTTAGGAGGTGATTGGGAT
TATATGGTATTTCTCATCCAAACAATCGACGACAACGACGATAACAACAACAACAATAATAATAAGACCACAACAACAACAATAGTTTCATATTTGTCTT
CGTTTTTGTTCTAGTACATGGACTACATAAGATATAGCCCTTCCTTACTCATGATCTCTATTTTAGGATGGATGCAAGATTTGAAAAGATGGTTCGAGAC
TTTACTAACTGAACTAGTTAATACCATCACACAATCATAATTGACACATGAGCTTTATTTCTATGTGTATGTGTTTATGTACATGCATATACATATGATC
TATAATTCTAGAGAGATAAGTAAGATTATATACCTTTTCAGATTGGACGGCTTTGATGGTGAGGGAATGGAGTCTCCTAGAAGGCAAGACTTTGAGGGGA
GAGCCAGAGAGGCCTTTGGGCGAGACCAAAGCTCTTGTGATTGGTGAGGTGAAACTGGACTTAAGCTGGCTGGCCATTGGGGAAGCAGTGGCCATGGCTT
TGCTTTCAGAAGAGAAACAAGTGTAAAGACTGAAGAGTAGCAGAGAGTTAGTTCTATGAGAAAG