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Detailed information on CNT30697930


BLAST search results

BLAST vs Swiss-Prot:
sp|Q71T45|H32_EUPES, E-value = 4e-73

BLAST vs NONCODE:
NONORUT005433, E-value = 3e-35

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675375Oryza sativaSetaria viridis33.0351.0688.89144forward
CNT30519871Oryza sativaSetaria italica68.1244.8686.2297forward
CNT30700039Oryza sativaQuercus lobata62.8456.0380.29274forward
CNT30376827Oryza sativaArabidopsis thaliana30.0555.5181.68131forward
CNT3069232Oryza sativaQuercus suber30.0527.6483.97131forward
CNT30200358Oryza sativaPisum sativum23.6216.5684.47103forward
CNT3048083Oryza sativaPrunus dulcis55.2834.3379.25241forward
CNT30177168Oryza sativaSecale cereale90.1452.8983.46393forward
CNT30283601Oryza sativaTriticum aestivum90.1460.9382.95393forward
CNT30219843Oryza sativaHordeum vulgare65.3749.6583.86285forward
CNT30398097Oryza sativaTriticum turgidum90.1451.3782.19393forward
CNT30565750Oryza sativaActinidia chinensis60.7824.1180265forward
CNT30591253Oryza sativaMusa acuminata26.1536.5484.21114forward
CNT30443502Oryza sativaAegilops tauschii65.8346.3782.23287forward
CNT30240007Oryza sativaAvena sativa65.8351.1685.37287forward
CNT30657055Oryza sativaTriticum dicoccoides92.4377.0682.63403forward
CNT30259840Oryza sativaBrassica rapa16.5124.9187.572forward
CNT30464179Oryza sativaSaccharum spontaneum29.8226.6493.85130forward
CNT30140729Oryza sativaLolium perenne92.6674.8183.17404forward
CNT306284Oryza sativaZea mays22.7146.2687.8899forward
CNT30606039Oryza sativaGossypium raimondii28.926.5881.75126forward
CNT30686633Oryza sativaTriticum urartu19.9531.4190.887reverse complement
CNT30720909Oryza sativaTriticum spelta92.4361.7282.38403forward
CNT30368649Oryza sativaSorghum bicolor53.6755.7181.62234forward
CNT30622400Oryza sativaCajanus cajan67.8932.3581.08296forward
CNT30596421Oryza sativaOryza meridionalis26.1516.2490.35114forward
CNT30358858Oryza sativaLactuca sativa30.0522.6680.92131forward
CNT30154413Oryza sativaPrunus persica23.8526.8784.62104forward
CNT30148402Oryza sativaBrachypodium distachyon31.6528.1186.96138forward
CNT3099660Oryza sativaOryza rufipogon22.2521.4190.7297forward
CNT30585391Oryza sativaEchinochloa crusgalli92.6662.0684.41404forward
CNT30114434Oryza sativaEutrema salsugineum30.0532.9180.92131forward

Expression of CNT30697930

Peptides detected in this lncRNA

>peptide 1 (36 aa)
AFSPLMRRASWMSLGMMVTRLAWITQRLVSLKSPTR*

>peptide 2 (73 aa)
LLAPDAARELDVLGHDGDAFGMDNTEVGVLEEPHKVGLGSLLQRNHGRALEANIGPNVLRDLLHQPLEGELAD*

Sequence

>CNT30697930
GCCTTCTCGCCCCTGATGCGGCGCGCGAGCTGGATGTCCTTGGGCATGATGGTGACGCGTTTGGCATGGATAACACAGAGGTTGGTGTCCTTGAAGAGCC
CCACAAGGTAGGTCTCGGCAGCCTCCTGCAGCGCAACCACGGCAGAGCTCTGGAAGCGAACATAGGACCTAACGTCCTGCGCGATCTCCTGCACCAGCCG
CTGGAAGGGGAGCTTGCGGATTAGCAGCTCTGTGCTCTTCTGGTATGTGCGGATCTCTCGGAGTGCGACGGTCCCTGGCTTGAAGCGGTGTGGCTTCTTC
AGCCCTGCCATCGTCGGTGCTGACTTGCGTGCCACCTTCATCACCAGCAGCTTCCTCGGCACATTGCTGGCGGTGGACTTCTTCGCCGTCTGCTTTGTGC
GGGCCATCTCTCACCGAAGGAGAAAGAGAGGAGAAG