Detailed information on CNT30697928


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30597222Oryza sativaOryza meridionalis36.367.99100112forward
CNT30108266Oryza sativaOryza longistaminata42.5310.6495.42131forward

Expression of CNT30697928

Peptides detected in this lncRNA

>peptide 1 (35 aa)
PASTTAGDELITRQLDGRNKRKPVSCSSDLHWWKY*

>peptide 2 (41 aa)
RRQRRPATSSSPDNWMEGINGSQSLALQTYIGGNIEGLHLT*

Sequence

>CNT30697928
CCGGCGTCAACGACGGCCGGCGACGAGCTCATCACCAGACAATTGGATGGAAGGAATAAACGGAAGCCAGTCTCTTGCTCTTCAGACTTACATTGGTGGA
AATATTGAAGGGCTTCATCTTACATGATCTCACTGGTACGTAAACTTGAGTTCAGCAACTGCATAGACATCACCATTTGGTCTCATGAAGCTCACTAGTG
AAGTCATATAGTATGGATTGGTATCTGTTTATCCAAGAACAATTCAAGTTATTATGGCTTTACCTATGTATTGTCTACAAAATTTTTGTTTAGTCTGTGA
TTAAAATA