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Detailed information on CNT30697923


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000351, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30552893Oryza sativaOryza glaberrima99.8757.0294.191498forward
CNT30596220Oryza sativaOryza meridionalis10.624.3185.53159forward
CNT30370799Oryza sativaOryza glumipatula50.73100.9388.96761forward
CNT30109864Oryza sativaOryza longistaminata99.7377.9698.531496forward
CNT30103930Oryza sativaOryza rufipogon100.0763.87931501forward
CNT30577378Oryza sativaOryza barthii100.263.6392.881503forward
CNT30118054Oryza sativaOryza nivara72.6795.0395.231090forward
CNT30603852Oryza sativaOryza punctata47.275691.11709forward
CNT30550878Oryza sativaOryza brachyantha14.1321.0183.02212forward

Expression of CNT30697923

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MCESSLPGSARTPLTARNRVRLECMRTQVHGAGTAKVRLLKGFAMASLIRWDVGSCVGQVAE*

>peptide 2 (30 aa)
MIFENSALRKVTIATPCIILYITAFCVVAC*

>peptide 3 (42 aa)
MIGVRFHSRSRSPVDCLWHVNRALVLFCLPLLFSDSCWPAWP*

Sequence

>CNT30697923
CCCTTGTACCCATAATTACGTATGAGTCCCTAGTCACTTATGACAAATGCTTAGTACTGCTAATTTAGATCTATGCATTCTCATATTTATCAAATGCTTT
ATGTTTGGGTAACTACCTTGGGGAAGGTAGTTGAGATACGGCATGTGGAGATATGAGCGCCACATTGCCATGACATTGATGAGATGATTTGTGAAAGAAA
GTTAAAACTAAAGAAATGTTTTCGACTGGGGCGGCTGGAGGACTTGGGTGGTGTCCGGTAAAGGCTAGTGCCGTCCCTGGTCAATTAAGGACCGAGCCAT
GAAGCTAAGCATGAAACGACTCCAGTACAACCGTACTTCTCGTATGGGTATAGACCTAGCGGAGTAAATAGCCGAGCGGAGGCAGTATCTCTGCATAGTG
GTTTTCTTGATGTGTGTGAGGCAGGGCCTACGGTGGGGCAGCCATTGGTAGGACCGCGAGGGGCGGGTGCCTACAGTGGTGTCGCCATCGGTAGGACTGC
CATGTGTAAACCTAAACTTAACTATAACTTAATGCATGTGTGAGTCTTCCCTTCCCGGGAGCGCCAGAACTCCTCTCACTGCTAGAAACCGTGTACGCCT
AGAGTGCATGAGGACTCAAGTTCATGGAGCGGGTACTGCCAAAGTGAGGTTATTGAAAGGCTTTGCCATGGCAAGTCTCATCCGTTGGGACGTAGGCTCA
TGTGTTGGGCAAGTCGCGGAGTAAGGGTAAAGTGTACATCCACTGCAGTGTGAGTAAACCAAATCTATTCGAATAGCCGTGCTCGCGGTTATTGAGCACC
GGGACATGTATTACACTTGGCTAGACTCTAAATTCTTAAAATGATGGGTGGGATGTTGCATGATGATTTTGTACTGGTGGATCAACTTCTCGAGAGGCGA
GAAGGGGTAGACCCTAGAAAACCATGACGACCAGTGGCGGGAAGCTATCCTTGGGAACACAATGGATGGTGGACAGAACCGTCGCTGTTTAATGAACAAT
GGAATTAAAACTTGACCAGTTTATGCTAGGTCTTAGGTTTGTGAAATGATATTTGAAAACTCAGCTTTACGCAAAGTAACCATAGCCACTCCTTGTATTA
TCCTGTACATTACTGCATTTTGTGTGGTGGCTTGCTGAGTACTTTTGTACTCATTGTTGCTCTATATATATTTTTTAGCAGAGTGTTGAAGAGAAGCCAT
TGTTAGTACGCTTGCGTACTTAACAAGATGATCGGAGTGCGATTCCATTCTAGATCTCGTTCCCCAGTCGACTGCTTGTGGCATGTCAACCGGGCCCTTG
TATTATTTTGTCTTCCGCTGTTGTTCTCTGATAGTTGTTGGCCTGCCTGGCCCTAATGTAAGCATTTAACTCTCTTAGCCTGAATTCATTCGTGATATGT
TGTGATTCGGCTATGTATGTGTGTACCAACTACTGATCCAGGGATTGGTACTGATAAACACAGAAGATTTCCGATTTCCAAAATCGGGGGTCGACAATCC