Detailed information on CNT30697881


BLAST search results

BLAST vs Swiss-Prot:
sp|B3A0N2|NLTP_LYCBA, E-value = 4e-08

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524578Oryza sativaSetaria italica27.0818.7187.1878forward
CNT30550009Oryza sativaIpomoea triloba22.221185.9464forward
CNT30440524Oryza sativaAegilops tauschii23.618.9186.7668forward
CNT30136898Oryza sativaLolium perenne19.122.8290.9155forward
CNT30597178Oryza sativaOryza meridionalis37.532.9396.3108forward
CNT30371399Oryza sativaOryza glumipatula28.1219.1597.5381forward

Expression of CNT30697881

Peptides detected in this lncRNA

>peptide 1 (39 aa)
LLQSVERLMGKPTLTPHLPGTPATVPRCTARSPIPPDRT*

>peptide 2 (36 aa)
LVAVGGEADGEANVDAAFAGDAGDGAEMHGAIADPT*

Sequence

>CNT30697881
CTTGTTGCAGTCGGTGGAGAGGCTGATGGGGAAGCCAACGTTGACGCCGCATTTGCCGGGGACGCCGGCGACGGTGCCGAGATGCACGGCGCGATCGCCG
ATCCCACCTGACCGCACGTGATCGCCGCCGACGCTCCCGGCGCCGCCACCACCATCGCCACCACCATCACCGCCACCACCACCTTACCGTTCAAAGCCGC
CATATTCAAGATTACTGATTTGATCGTCGGATGATCGATGATCTGATGATCGAGTAGCTAAGCTAGATAGCTAATCGTCGCCGCCGGT