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Detailed information on CNT30697843


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670953Oryza sativaSetaria viridis10.9237.05100342forward
CNT30524653Oryza sativaSetaria italica25.4466.5396.61797reverse complement
CNT30548882Oryza sativaIpomoea triloba31.6637.6398.59992reverse complement
CNT30378671Oryza sativaArabidopsis thaliana4.8253.5598.68151forward
CNT30632593Oryza sativaVigna unguiculata31.8559.1297.6998reverse complement
CNT30504983Oryza sativaNicotiana attenuata12.1620.9298.69381reverse complement
CNT30158473Oryza sativaPistacia vera1.9527.9810061reverse complement
CNT30637323Oryza sativaCapsicum annuum15.133.591.33473reverse complement
CNT3098505Oryza sativaSolanum tuberosum15.4549.3494.83484forward
CNT30304298Oryza sativaTriticum aestivum38.1745.299.161196forward
CNT30221494Oryza sativaHordeum vulgare30.2376.2598.63947reverse complement
CNT30400948Oryza sativaTriticum turgidum38.1747.8499.331196forward
CNT30569653Oryza sativaActinidia chinensis10.0947.0996.84316forward
CNT30585815Oryza sativaMusa acuminata31.7340.9695.88994reverse complement
CNT30234810Oryza sativaBrassica oleracea1874.593.97564forward
CNT30553404Oryza sativaOryza glaberrima27.4560.9199.3860reverse complement
CNT30147394Oryza sativaMedicago truncatula31.795098.19996reverse complement
CNT30440683Oryza sativaAegilops tauschii25.1281.4799.62787reverse complement
CNT30248040Oryza sativaAvena sativa24.957.9598.46780forward
CNT30662061Oryza sativaTriticum dicoccoides37.7661.6599.321183forward
CNT3081478Oryza sativaBrassica juncea23.5263.6495.25737reverse complement
CNT30263293Oryza sativaBrassica rapa5.0437.887.34158forward
CNT30143344Oryza sativaLolium perenne44.7262.6399.071401forward
CNT3016633Oryza sativaZea mays39.2964.4297.561231forward
CNT30229838Oryza sativaAnanas comosus14.1410097.97443forward
CNT30218527Oryza sativaKalanchoe fedtschenkoi23.9150.398.8749forward
CNT3067373Oryza sativaLeersia perrieri8.9492.7299.29280reverse complement
CNT30655299Oryza sativaRosa chinensis31.6334.9298.59991reverse complement
CNT30203595Oryza sativaHelianthus annuus32.0154.7596.911003reverse complement
CNT30689128Oryza sativaTriticum urartu38.1764.3498.831196reverse complement
CNT30721611Oryza sativaTriticum spelta7.1548.5999.11224forward
CNT30595506Oryza sativaOryza meridionalis14.7842.0997.41463forward
CNT30360998Oryza sativaLactuca sativa9.2610098.97290reverse complement
CNT30369805Oryza sativaOryza glumipatula45.7199.8697.911432reverse complement
CNT30154718Oryza sativaPrunus persica15.1368.493.46474reverse complement
CNT30420891Oryza sativaPapaver somniferum18.8321.9792.54590forward
CNT30323793Oryza sativaAsparagus officinalis6.3863.2998200reverse complement
CNT30151602Oryza sativaBrachypodium distachyon6.842.5199.53213forward
CNT30104648Oryza sativaOryza rufipogon18.64100.1799.14584forward
CNT30575706Oryza sativaOryza barthii71.1891.5196.462230reverse complement
CNT30582488Oryza sativaEchinochloa crusgalli38.6599.7599.671211reverse complement
CNT30495774Oryza sativaDigitaria exilis12.5499.24100393forward
CNT30116696Oryza sativaOryza nivara74.9859.2499.912349forward
CNT30604605Oryza sativaOryza punctata2.6836.3691.6784forward
CNT3040451Oryza sativaMarchantia polymorpha5.7830.8393.37181reverse complement

Expression of CNT30697843

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MYAFSNLFGTCCVCPRLSRLRIERFRRFRLGCTEHFSRSGFSGTEKSLILVSFHLHLLSF*

>peptide 2 (37 aa)
MGDHWSDASGETNSQGVTGGVYRARVHIHRGMLIRDY*

>peptide 3 (31 aa)
MSPEQFQYIWRKTIPHIYRGRNGIGCFHVSP*

>peptide 4 (50 aa)
MIAHSTKELYKRHCPSSLTRYCWIGLSPIVQDSPLLPPVGVRAVSQSQCG*

>peptide 5 (68 aa)
MLSHPSVGRDPESCLRFWRSFVDLRISPLHTKFHSPLSHSSELVSRAFRHFLATFTFNPIHRLRALYA*

>peptide 6 (66 aa)
MLHRLCRPPSIPLSFGLATVLPRRSVSRVSWAPDPRRPRANTHRLRHGLPGYLILFAPHAFAPQRR*

>peptide 7 (30 aa)
MSPLCRRNSCTPFRTSSGPVVSALDLAVLE*

>peptide 8 (31 aa)
MFPSCREQSELRQSFRIRSALQPCFPLSLPL*

>peptide 9 (30 aa)
MLNTLHRSKTTSKGISSYCRKGKITPFLYI*

Sequence

>CNT30697843
CTCTCACTTGGTTGACAACCAATGAGCCCCTTATGTAGGAGGAACTCATGTACGCCTTTTCGAACCTCTTCGGGACCTGTTGTGTCTGCCCTCGACTTAG
CCGTCTTAGAATAGAAAGGTTTCGCAGATTCAGATTAGGATGCACTGAACACTTTTCCAGATCTGGTTTTAGCGGCACTGAAAAATCTTTGATTCTCGTC
TCGTTTCACTTGCATTTGCTTTCGTTCTAAAGTGGAATCGAACCACTCACTCCGTTTGGATTTAGAGTCCAAAGGGCCCAGGCCCAGCGAACGAAAAAGG
AGTTACAGTCCCACGCCCACTGCCCTGCCTTCACCTTTTGATTGCTTTATTTTTATACGATTTTTTGAGCAACTAGCGCGAAAGCCGTTGCGCGTTAGCG
CATTCGGAACCACACATTTTTATACGATTTTCGGATCATTTGATTTTCGTTTTGAAAACTTTAAAACCTTATCAGAGAGGGGCCACTAAGGCTGGATGTT
GGCTTCAAGAAATCTCCTTTAGCCTTACCCCGGGCTTTGACCATGTCTCCCGAACAATTTCAGTACATATGGCGCAAGACGATTCCACATATATATCGAG
GTCGGAATGGGATCGGGTGTTTTCACGTCTCACCGTAGTGCCCGGTTTGTCTTGATTGGTGATTGATAAACAAGAAGGAAAATGGAAAAGTAGAAAATCT
ACATAAGCTTCCGTTGAGGTCCTTAGTTTAGTCAAGTAGGCGAGGGCATTTCCATCGCGAAGGATTCAATCCAGCCACAGGTTCCCCTACGGCTACCTTG
TTACGACTTCACCCCAGTCGAAGACCCCACCGTGGTATGCGCCAATAAGACCACCAAAGGCCTTTGTGGCACTAGTGGTACACAGAAGTCATGGGTGATC
ATTGGTCCGATGCTTCGGGCGAAACCAATTCCCAGGGTGTGACGGGCGGTGTGTACAGGGCCCGGGTACATATTCACCGCGGCATGCTGATCCGCGATTA
CTAGCGATTTCAACTTCATGTTCCCGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGGATTCGCTCCGCCTTACAGCCTTGCTTCCCATTGTC
ATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCATGCGGACTTGACGTCATCCCCACCTTCCTCCAGTATCTCACTGGCAGTCCCTCGTGAG
TGCGGCACGCACCTTTTTCTTTGTTTCGGAGCGGGGCGCGTACTATTACCACTACGTACCACAATTTCTCCTTAGGCGCATGTCTCAGCAACACAAAACG
AGGGTTTCGCTCGTTATAGGACTTGACCAAACATCTCACGACACGAGCTGACGACAGCCATGCAGCACCTGTATGAAAGTCAGTACCATCCCGTTAAGGA
CAGGTTTTGTTGTTCATATGTCAAGGGCTGGTAAGGTTTTGCGCGTTGTATCGAATTAAACCACATGCTCCACCGCTTGTGCAGGCCCCCGTCAATTCCT
TTGAGTTTCGGTCTTGCGACCGTACTCCCCAGGCGGAGTGTTTCACGCGTTAGCTGGGCCCCTGATCCGCGTAGACCAAGGGCGAACACTCATCGTTTAC
GGCATGGACTACCAGGGTATCTAATCCTGTTCGCTCCCCATGCTTTCGCACCCCAGCGTCGGTAGGGACCCAGAGAGCTGCCTTCGCTTTTGGCGTTCCT
TCGTAGATCTACGGATTTCACCCCTACACACGAAATTCCACTCTCCTCTGTCTCACTCAAGTGAATTGGTTTCGAGAGCATTCCGCCACTTTTTGGCGAC
TTTCACTTTCAACCCGATTCACCGCCTACGTGCCCTTTACGCCTAGTCATTCCGAAGAACACTTGCCCCCCCCGTCTTACCGCGGCTGCTGGCACGGAGT
TAGCCGGGGCTTCTTCCTCGAGTCCTGTCATGATCGCGCACTCGACGAAAGAGCTTTACAAGCGGCATTGCCCTTCTTCACTCACGCGATATTGCTGGAT
CGGACTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAAAAGACCAGC
TAAGCATCATTGGCTTGGTCAGCCTTTACCCGACCAACTACCTAATACTACGCAGGCTCATCAAACAGCGCTTTTGAGCTTTCTTCAGGATTTGGCCCGA
ACTGTTCGGCAGATTCCCACGCGTTACGCACCCGTTCGCCACTTTGTTCTCAACTATTCCGATTCCAGCAAACGGAGGCCGTTAGGTCAAAGCCGTAGCG
CGCGCCCTGTAGTTTTGAAGCAGGGCGAGACTACTTTAGCTAGGAGCCTCTTTTCCTTCTGCCCAGCTCCCCGAAAACAACGTTCGACTTGCATGTGTTA
AGCATATAGCTAGCGTTCCTTCTGAGCCAGGATCAAACTCAGATTTTGACTATGATTGGGCCGAACAGTGGTAGAACCTGGTGAACCGGGCCTACTACTA
AACATTGATTCTCTCTCCTAACCACTCTTAAATATGTTAAATACACTCCATCGATCAAAAACTACAAGCAAGGGAATCAGCTCTTATTGCCGTAAAGGAA
AAATAACCCCTTTCCTTTATATATAGTCCGCCAAGGGCCTTCGCCACCTATTCCTTAATTACGTAGTGGGAAGATTTCTCTATGTCAATTGAAAACAAAA
CAAACGGACGACTGAATCTAAAGTCTACTAGAGAGAAGATTGGTTCGAACGTCAACTACTGATTGCTCTATCCAACCAGCACATACCGTTTGCTATGATA
TTGTTTTGCGGATTTGCTCATATTGTTTTCTTGCCCGGGCATTGCTGCGGAAGAGTGAAATGAAAAACTCTTCTTGAAGAAGAGGACTCTTCCGCTTGAT
CTTTTGATACGGTGAGGGAACAGGTTTTATGCGTTCTTTGAGCAAATGGGGAAACAAACTGCTGATACAGAAATCTTTAACTGAACTGCCGAAGGCACAA
GAGAGACTATAGCCAGGAAGGATAAGCAAAGGAATCCAGATTCAATCGATTGTTTGAAGCCAAGGAGCAAGAAAACGGATGCGCGTGCTAACGCTTTCGC
GCTAGTGCGCTCAATCCGTTGCTTGTTCTCGAG