Detailed information on CNT30697833


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30576349Oryza sativaOryza barthii9.5532.1885.29102reverse complement

Expression of CNT30697833

Peptides detected in this lncRNA

>peptide 1 (98 aa)
MRARPWRAAASWRPSRPGAAPWTSPSPSCAAVAGELQGRSLLPLAPLPLSLSSPIPANTVRCRSTTSTPSQSPVPRHRVRLHLLLPTPTLVVAAMRCH*

>peptide 2 (85 aa)
MAEHGQGAMAALPPPPSLTYGCSRTWSAYTNGPWVKLSFMKVCLTVSAGNNKITGGVSASKLPYFFGVQEQIHDLRMSHSKDHNL*

>peptide 3 (47 aa)
GPLDFGGLRRPHGLTLPRAGPVDTRGIILLFSVKTERERVLKVPKFP*

>peptide 4 (47 aa)
MGRARFCLWPTGDDEGAAVASRRVVEAITAGCCAVDIAVSFLRRRRR*

Sequence

>CNT30697833
GGGGCCCCTAGATTTTGGGGGCCTCAGGCGGCCGCACGGCCTGACCCTCCCTAGGGCCGGCCCTGTGGACACTCGAGGCATTATTTTATTATTTTCGGTG
AAAACAGAGAGAGAAAGAGTGTTGAAAGTACCAAAATTCCCTTGACACTGTTCTTCTTTCTATTTTCTTTCTTCTCTCTTTTCTTCTCTCTTTCCTGCCC
CTGACACGGGTCGCGTCCTTCGCTGCAGGAGGCGTCGCGCGTGGCGGCGCCGTGCGGGAGGTGCTGCTCACGCAGTGGGAGGGGCGGGACGACCAGTTGC
TGGTGTACGGTCTCCTCCCGGCAGGGGTGGACCACGGCGAGCTCATGGGCAGAGCGCGGTTCTGCCTGTGGCCGACCGGCGACGATGAGGGCGCGGCCGT
GGCGAGCCGCCGCGTCGTGGAGGCCATCACGGCCGGGTGCTGCGCCGTGGACATCGCCGTCTCCTTCCTGCGCCGCCGTCGCCGGTGAGCTCCAAGGCCG
AAGCCTTCTTCCCCTCGCGCCACTGCCTCTCTCTCTCTCTTCCCCAATTCCGGCCAACACCGTCCGTTGCCGCAGCACCACCTCCACGCCATCCCAGAGC
CCCGTGCCGCGCCACCGGGTTCGCCTCCATCTCCTCTTGCCGACGCCGACGCTCGTCGTGGCAGCCATGCGCTGTCACTGACGAACACCACCGCGCTGCC
GCCATGGCAGAGCACGGCCAGGGGGCCATGGCTGCTCTGCCTCCTCCTCCTTCTCTCACATATGGTTGCAGCCGGACCTGGTCGGCTTATACAAATGGCC
CATGGGTAAAATTGTCTTTTATGAAAGTTTGTCTCACCGTTTCAGCTGGAAATAATAAAATAACGGGAGGAGTGTCCGCCAGCAAATTACCATATTTTTT
CGGTGTCCAAGAGCAAATACACGATCTTCGGATGTCTCACAGCAAAGACCACAATCTTTAAGTGTTCTGTAGCAAATTTTACCTTTTTTTTTCATCATAA
TGGGGAGCTCACCATTAGCCAGCTAGATATAGCTGCTGTTAATTCTTGAAGGCACACAGGGATACAGG