CANTATAdb - search

Detailed information on CNT30697813

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT004564, E-value = 2e-95

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30596950	Oryza sativa	Oryza meridionalis	17.72	99.65	95.12	287	forward

Expression of CNT30697813

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MNVSVVSSQIKAYPSNIVCRWLLIPTMGANGML*

>peptide 2 (31 aa)
MIEADLLFQSYMHLHRASRKPFFEVYTGRSC*

>peptide 3 (55 aa)
EEWRRKNRNFDLFHLLKSAPTPTNSIVVSGGKFPETLIPAPLIELQNSSHTSSIL*

>peptide 4 (36 aa)
KNGGERTAISTSFTFSSLPLLQLTQSSSAEENSQKP*

Sequence

>CNT30697813
GAAGAATGGAGGCGAAAGAACCGCAATTTCGACCTCTTTCACCTTCTCAAGTCTGCCCCTACTCCAACTAACTCAATCGTCGTCAGCGGAGGAAAATTCC
CAGAAACCCTAATACCGGCACCATTGATTGAACTTCAAAATTCGTCGCATACATCGTCAATCCTCTGAAATCGAAGAAAACGCTGACGTTGGTTCGGTAG
TCGAAGCGAGTGAAATCTCCGCGCCAGGAGGAGACGGTTTGTACGACTACATCGAACCCGAAGATCATGAGGAGGAAGATGCTTGTGGAGAACCTGTTGA
TCTGTTAGAGTGGGACAGCTATGGTTTCTAGGTCATCATATGCTTAGGCAGTTCCTGTGGTGAAGTCTAGCAGTTTATTTGTTTGTAGAAATAAAGCTTT
ATAGGCCATATATGTAATGGTTTGTATTTATGTTGTGTTGTGAACTAAGTGACTTAAGTATTGTATAATCGAAGGTTATGCTTTTATATCATTTCATGCG
TAACTGAACATCCTGGGCAGTTACTTATTCGTGGGGCACCATGACTTTATCGGGTGTCCCCACAATAGCCCTTTTAGACCTTCCGATCTCCCTGTCATCC
AAGTAAAAGGGAAAAAACTTGTGTTAAAGTATACCGGAGCCCACATTTCTTTTGCTTCCCACAAGTTATTCAAAGTTTGGTTTCCATGGAGGTCATATTC
ATCTAGCATTTTTTTCAAATATGATAGAAGCTGATCTATTGTTTCAATCATATATGCATCTACACAGAGCTTCAAGGAAGCCTTTCTTTGAAGTATACAC
GGGTAGGAGTTGCTGATCTGCTTTTGTTGTCACGTGCCAAAAGCAACATCTATGAATTGTACCGGGGAACACCTTTTTAATCATTGCTCTCATTGCTTTA
TCTCGGTCTATCATCACTGAACCTGACATCTGTCCATTCATTGCTCGCATCCATGTTTCAAAGACCCATATGAATGTTTCAGTTGTTTCATCACAAATCA
AAGCATATCCAAGCAATATTGTTTGCAGGTGGTTATTAATTCCAACAATGGGTGCAAATGGCATGTTGTAACGGTTAGTCATAAAGGTTGTGTCAAAGAA
GACACAGTCTTTATAGCTTTGATACAGTTTTCGTGTTCTGCCATCCACCTGTTAACAACCAAATTTGGTAACATCTGTGTCAGGAAAGAAGGTTGGATCA
AAGCAAAGTTAGAGGCAGAGATCAAGTTCGGAAATAGAGCAGGAATCGGCTGGAGTCCAGATCGGCTATGATTAGAATCGGCTAGGTCTGAGTCGGGCTG
AGTAAGCCGATACAGCTGATTCCGACAATACGACTTGTACGCGACATCGGGTTCAAGTTAATGTACTTCAAGATGATTGCCACGCACGGATAGAGTCCTG
GGAAGGCAATTGTATCTATTAATTAGGATATTTTTATGTAAATTCCTTATAGATAAATGTGGGCAAAAGTCTGTCGCAAAGACTTATGGTATCTTAGAGT
TTGTTAGAGATAATAGTCGTGTCCGGTGTGGGCATATCTTGTAATTCTCGGGTATAAATAGACCCCGAGCCCTATGTAATTAACAACACACACGTTCAAT
ACAACTTCAGCGCATCGCCA