Detailed information on CNT30697812


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT302108Oryza sativaZea mays31.2566.6787.33150forward
CNT30118042Oryza sativaOryza nivara25.8319.8199.19124forward

Expression of CNT30697812

Peptides detected in this lncRNA

>peptide 1 (99 aa)
MGTPPGRGRRRRGRRRAAAARRRAARRGCPGRSPPTAPPAPPPWTTGPAAPPPTATARRAPPPTGAPPSPPSSAAAASPRSSAASPAAPPPSRSSSASAP

Sequence

>CNT30697812
CAGTAATTGATATACACACTAAATACTCTGCTTAATTACACACTAATTGCAAATTAAGTGGTAATTAATCACTCAAAGCTAAGGCAGTGAGCATGTAATC
GCTTCAGCTGGACGAGCTCTGGAGCTTGGACACGAAGCTGGAGGCGGCGAGCGCGACCACGGCCTGGACGGCGACCTCCCATGGGTACTCCTCCGGGACG
AGGTAGACGACGGCGGGGCCGGCGGCGAGCAGCAGCAGCGCGACGCCGAGCAGCGCGCCGGGGGTGCCCGGGTCGGTCGCCGCCGACAGCACCTCCAGCT
CCTCCGCCTTGGACAACAGGCCCAGCCGCTCCACCGCCGACAGCGACAGCCCGGCGCGCTCCGCCGCCGACAGGAGCCCCGCCTTCTCCGCCTTCGTCAG
CAGCCGCAGCTTCTCCACGTTCGTCAGCAGCTTCACCGGCGGCGCCGCCGCCTTCCCGCTCGTCGTCTGCCTCGGCCCCG