Detailed information on CNT30697733


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6ENC9|YCF72_ORYNI, E-value = 7e-43

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30509771Oryza sativaSolanum lycopersicum8731.390.55328forward
CNT30555485Oryza sativaOryza glaberrima25.737.7798.9797reverse complement
CNT30145938Oryza sativaMedicago truncatula27.856.687.62105forward
CNT30265789Oryza sativaBrassica rapa27.3212.7299.03103reverse complement
CNT30683778Oryza sativaTriticum urartu26.7932.0699.01101reverse complement
CNT30339731Oryza sativaEragrostis tef63.9371.9495.44241forward

Expression of CNT30697733

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MLWKKLVQFGKGFFERKEESTSTDMPLGTAIHNIEITRGRGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLVSQ

Sequence

>CNT30697733
CGGAGACCTAGGATGTAGAAGATCATAACATGAGCGATTCGGCAGATTTGGATTCCTTTCCTATATATCCACTTATGTGGTACTTCATCATACGATTCAT
ATAAGATCTATCTGTCTAGAGATCATCATATACATCTAGAAAGCCGTATGCTTTGGAAGAAGCTTGTACAGTTTGGGAAGGGGTTTTTTGAGAGAAAAGA
AGAATCTACTTCAACCGATATGCCCTTAGGCACGGCCATACATAACATAGAAATCACACGTGGAAGGGGTGGGCAATTAGCTAGAGCAGCAGGTGCTGTA
GCGAAACTGATTGCAAAAGAAGGTAAATCGGCCACTTTAAGATTACCATCTGGGGAGGTCCGTTTGGTATCCCAAAA