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Detailed information on CNT30697712


BLAST search results

BLAST vs Swiss-Prot:
sp|P19656|NLTP_MAIZE, E-value = 2e-23

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30342139Oryza sativaEragrostis tef15.5829.7687100forward
CNT30367194Oryza sativaSorghum bicolor11.3730.887.6773forward
CNT30103992Oryza sativaOryza rufipogon74.4577.195.61478forward

Expression of CNT30697712

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MDDSIYFYLLQSVERLMGKPTLTPHLPGMPAAWRSAVVRAALFSPLTPLQHPWVRPPLPVT*

>peptide 2 (43 aa)
MHGAIADPTCPHVIAADAPGAATTIAITITAATALKFKAAISI*

Sequence

>CNT30697712
GCATGCTGATGCACGCACGGAGCGTGCAACATAAAGTATACAGAGATACAGAGAGAGATGACCAGCGCTGAATGATATGCCCCAGCTGTTATTTTTACTG
TAGCTATTATTTTGGCTAGTTGATCAACTGCGAGCCAGCATCGATCGATATATCGATCGGTCGGTCTACGCAGGATTAATCGATCTAGCTGACCCTGCAC
CAATGAAATAATCATGCATATATACAGTGGATTAGTCAGTAAATTAAGTTGAATTAACCTGAAAAAAGTAACATGCATGGATGATAGTATATATTTTTAC
TTGCTGCAGTCAGTGGAGAGGCTGATGGGGAAGCCGACGTTGACGCCGCACTTGCCGGGGATGCCGGCGGCCTGGCGGTCAGCGGTGGTGCGGGCGGCGT
TGTTCAGCCCCTTGACGCCGTTGCAGCATCCCTGGGTGAGGCCACCCCTCCCCGTCACGTAAGAGATGCACGGCGCGATCGCCGACCCCACCTGCCCGCA
CGTTATCGCCGCCGACGCCCCCGGCGCCGCCACCACCATCGCCATCACCATCACGGCGGCCACCGCCTTGAAGTTCAAAGCCGCCATATCTATCTAGACT
GATGGATGATCGATCGAGTAGCTAGGTAAGCTTCGTTCAGTC