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Detailed information on CNT30697711


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30110205Oryza sativaOryza longistaminata35.9927.9395.21167forward
CNT30117976Oryza sativaOryza nivara95.9180.9197.75445forward

Expression of CNT30697711

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MVNVAIFECDSVRIVNLDQLWQAQLLQNVLGVLKEALHQLQQTESVKLLAAS*

>peptide 2 (51 aa)
MTFIARTNASCMAGCFVVTGFAIYSVYWRRNSIQTCATDPWSMLLSLNVIV*

>peptide 3 (39 aa)
MLLAWLGALWSLALPFTQCTGEEIQFKPALPIHGQCCYL*

Sequence

>CNT30697711
GTATGACCTTCATTGCAAGGACTAATGCTTCTTGCATGGCTGGGTGCTTTGTGGTCACTGGCTTTGCCATTTACTCAGTGTACTGGAGAAGAAATTCAAT
TCAAACCTGCGCTACCGATCCATGGTCAATGTTGCTATCTTTGAATGTGATAGTGTGAGAATTGTTAATTTGGATCAGCTGTGGCAAGCACAACTGCTAC
AGAATGTGTTGGGTGTTCTGAAAGAGGCATTGCATCAGCTGCAGCAAACTGAAAGTGTCAAGTTACTTGCAGCAAGTTGATATGTTTTAAGGTAAAACCT
CCACTGTGGATTCAAACAGAACTTGATGGGGGTGCTAACTGTTTAAGCTTTTCATATTAACAATGTTATGATGAAGCCTTAATCTTTGTAACATGATCTG
ATCCTTGTATGATCAATTTGTTCGATCTGAAGCACCATAGATTCATAATGCATAAATATGTTAT