Detailed information on CNT30697705


BLAST search results

BLAST vs Swiss-Prot:
sp|Q93Z17|HLP_ARATH, E-value = 9e-42

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673042Oryza sativaSetaria viridis32.5238.3384.96133forward
CNT30101984Oryza sativaOryza rufipogon22.7411.3483.8793forward

Expression of CNT30697705

Peptides detected in this lncRNA

>peptide 1 (92 aa)
MLLFPEFVGNRTKYTSANQLAFVVHKDNRVVIKLDLAAIVASSLHSSTDNHSIDHISFLHLTTRLCFLDRSNYSVPEPRSFLPPQGLDAHNAL

>peptide 2 (62 aa)
MCSANARILRCFFFLSSWGTGPNTRVPISSPLLFTRTIALSSNWISLPSLRPRFIAARTTTP*

Sequence

>CNT30697705
AACACATGAACCGAAACACTTTGAGATCAGAAAGCACAAGAGTTCAGTTGCAGTTTCAGAACTAACAGGTAGGTTGCCAGGTATGTAAGCATCTCAAACT
ATGTGTTCCGCTAACGCTAGGATCTTGAGATGCTTCTTTTTCCTGAGTTCGTGGGGAACAGGACCAAATACACGAGTGCCAATCAGCTCGCCTTTGTTGT
TCACAAGGACAATCGCGTTGTCATCAAACTGGATCTCGCTGCCATCGTTGCGTCCTCGCTTCATAGCAGCACGGACAACCACTCCATAGACCACATCTCC
TTTCTTCACCTTACCACGAGGCTGTGCTTCCTTGACAGATCCAATTATAGTGTCCCCGAGCCTCGCTCCTTTCTTCCCCCTCAAGGACTGGATGCACATA
ACGCGCTTG