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Detailed information on CNT30697656


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30371499Oryza sativaOryza glumipatula25.4321.8585.61132forward
CNT30104407Oryza sativaOryza rufipogon25.4341.985.61132forward
CNT30604827Oryza sativaOryza punctata24.8630.7985.27129forward

Expression of CNT30697656

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MSFSFSGDSEPPSSSSYSTFILAKQEPAPAASIFVSVTCDLSLPTLLPAGTSRTSDLIM*

Sequence

>CNT30697656
CATTGATGTTGCAATAATATTTTAGCCTCCAAATTCAACCACAACACATGTTCAGATGTTTGTCTCTTTATTCATTATCGAAGTAAAAGTACATGCTCGT
ACGTACGGCATACATAGCTAGCTAGGCACATACAACACAATATCACAAATTATTAACTGCTCTCAAAAAAATCAAACGCCACGAGAAAATTGGAGCTCGC
ATTATTTAATTATCAGAAGCAGCAATACGGAGATGGATGTATATTATTTTGGTTTATGACAATTTTTAAGCATACTCGGTAGGGTGAGCGACGAGGATGA
GCTTCTCCTTCTCCGGCGACAGTGAGCCGCCGTCCTCGAGCTCATACTCCACGTTTATCTTGGCCAAGCAAGAGCCGGCACCGGCGGCCTCGATCTTCGT
CTCTGTCACGTGCGACTTGAGCTTGCCCACCTTACTTCCGGCCGGCACATCCAGAACCTCTGACTTGATAATGTGAGCTGCGTTGTCACGTGCCACCACA
CGTAATGCTTTTTTTTCAC