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Detailed information on CNT30697634


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000218, E-value = 1e-90

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30574788Oryza sativaOryza barthii29.0923.3198.86176forward

Expression of CNT30697634

Peptides detected in this lncRNA

>peptide 1 (33 aa)
LSSSSSLSPVKSGRRRHRSISSSIVPLAKSLHH*

>peptide 2 (60 aa)
MRVVREHKLPPTSPIPGHWSPSAPSLSLSLSLCVVTREEGEEEEDDGRKKKKEEKKKNKD*

>peptide 3 (37 aa)
MTGGRRRKKRKRKIKTDRVELMFLPKLGVQSHKLVSF*

Sequence

>CNT30697634
CTTGAGCTCTTCTTCTTCTCTCTCTCCTGTCAAGTCCGGCCGACGCCGCCATCGGTCGATCTCCTCCTCTATAGTTCCCCTAGCTAAATCCTTGCACCAC
TGACTCCCCCTCCCTCCGGCGAATCCATTTTTCCCGTTTTCCCCTTCTCCCCCACCCCATAGCAACCACCACAACTACCTCCTTTGCAGCCGAAGAGAAG
CTCTTCTACTTGCCGTTCCGGCCAACTCCTCATCTCCCTCTGCCGGAAACCATCCTCCCCAGATGCGCGTCGTCCGGGAACACAAGTTGCCGCCGACGTC
GCCGATCCCCGGCCACTGGAGCCCCAGCGCCCCTTCTCTCTCTCTCTCTCTCTCTCTCTGTGTTGTTACACGGGAAGAAGGAGAGGAGGAGGAAGATGAC
GGGAGGAAGAAGAAGAAAGAAGAGAAAAAGAAAAATAAAGACTGACAGAGTCGAATTGATGTTCTTACCGAAGCTGGGAGTTCAATCACATAAGTTAGTT
TCATTCTAACTTAATTCGCAAATATAGATTAGACAGATGGTTTAAGTCTATAGCCAAACATTAGAGTTAAGTCATTCTATAGCTTTTGCTGTAATAGTTA
GCCAC