Detailed information on CNT30697566


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30555549Oryza sativaOryza glaberrima85.0783.394.331481forward
CNT30104337Oryza sativaOryza rufipogon89.210098.911553forward
CNT30117980Oryza sativaOryza nivara60.1410098.471047forward

Expression of CNT30697566

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MTTARGRSACDDGRAGSPKQQTDHNVLRFFCHCFIDDFFIRSSIHLVVLVLVNVRWVVSGFVDPVWQ*

>peptide 2 (61 aa)
GFDPHEHYLILSELAVRRRRGCRSRLSGIRAATAVLVRLAGRWRALFGERGGFGIRGARRR*

>peptide 3 (46 aa)
MASMLKKTDAVMKIIFNLFYYQLLSMASSFFVADLSLFVTDSILPF*

>peptide 4 (41 aa)
MSCILACHVFDDVVGLYQSIISLKRMIYRILFCGPNGTLMV*

>peptide 5 (35 aa)
MMAARVHQNNKQITMFCVFSAIVLLMIFLFGVLFI*

>peptide 6 (33 aa)
MCIDMLALYLLSLLCKFGHIEFCLIIIETLFSS*

>peptide 7 (32 aa)
MKLLLCKQRRVTSEYDSERWCEVATTGRWRVC*

Sequence

>CNT30697566
AGGGTTTCGACCCTCACGAACACTACTTGATCTTATCTGAGCTTGCCGTCCGGCGGCGCCGCGGCTGCCGGAGTCGCCTCTCCGGCATTCGCGCCGCCAC
CGCTGTCCTCGTACGGTTGGCGGGAAGGTGGCGCGCTTTGTTCGGGGAAAGAGGCGGGTTTGGTATCCGTGGCGCTCGCCGGCGGTGAGCGATGACGACT
GCCCGCGGTCGGAGCGCGTGCGATGATGGCCGCGCGGGTTCACCAAAACAACAAACAGATCACAATGTTTTGCGTTTTTTCTGCCATTGTTTTATTGATG
ATTTTTTTATTCGGAGTTCTATTCATTTAGTTGTTCTCGTATTAGTCAATGTGCGTTGGGTTGTTAGTGGTTTCGTAGATCCTGTTTGGCAATAGTGGAT
GTAAAAGCGCTTTTTGTTTGTGTAGAATGTGTTAGGATAGTATACAAATGTTTTGTAATTGAACATGTGCATAGATATGTTAGCATTGTACTTGTTGAGC
TTACTTTGTAAGTTTGGGCATATCGAATTTTGCTTAATTATCATTGAAACCTTGTTTTCATCCTAGTTTTGTAGTTTAGTTTTTAAATATGTCCATATTA
CAGTATCACTCCACTTCAGTTCAATGTCATGTATATTAGCATGCCATGTTTTCGATGATGTTGTAGGTTTATATCAATCAATTATTAGCTTAAAGAGGAT
GATATACAGAATTCTATTCTGTGGACCAAACGGAACCTTGATGGTTTGAGGACAGTCCCTTCAATGATATACAAATCAAATATTTTCTTGTGTCCTTGAG
AAATTTGGAAGACGCACTGTTAAAATCCATGTCTTTTTTGCTATGCATGGCTGATGTGGACTCTAATTTCTCCTCGGTTTTGAACTTTTGATGCGGACTC
TAATTGCAAGATCCTTTTGAAAATCGTGGTTTTTCTTCCACAATGTGGTTTTGACTAAATAAACGTTCAAAGTTTAAAAAAAAAGCCCTCATGACTTGAC
TTGTGCATTTTTGTATCAACCTGAATCAGCTCAGCATCTTTTCTTGGTTTGCAACATTGCATAAGTTTGTAGGGTTTTAGAAGCCGTGCAGAGCACTACA
ACAGTGCCTACAATCCGTCTGTTGGATGCACGGCCTTTATGTGATCATTCTAATGGAGTAATGGCCTTCCATTGCTATATCTGGAACATATAGATAACAA
GTCTTGTTTTGAGTGCAAAAACTGTCACTTTGATGTGATCTTTTGAATTTGTACAAATTTTAATAGTGGGCAGGTTTAAGCAAGGATGAAGCTGCTGCTG
TGTAAGCAAAGGAGGGTAACTTCTGAATATGACTCTGAACGTTGGTGTGAAGTTGCAACAACGGGAAGATGGCGAGTATGTTGAAGAAAACTGATGCAGT
CATGAAGATCATATTTAATCTTTTCTACTACCAGTTGTTGTCGATGGCTTCTTCATTCTTTGTTGCTGATCTATCGCTGTTTGTCACCGACTCGATACTT
CCCTTTTAGTTTTAGGTTGACTAAGGCTAGGTTTGTCACCGACTCGATACTTCCCTTTTAGTTTTAGGTTGACTAAGGCTAGCTTAAGCTTGGGTATTTT
GTCTGTATGATCACCTGCTTTGCTTTCCCTGTTCCCAAATGTACTCTGAAAATAAGAACTATGTTATTTCTCTTCATATCAAATGTATAAATGGTTACCC
TGTTAAAAGAGATTAATGAACTGTCATGTGGTTCTTATTTT