Detailed information on CNT30697502


BLAST search results

BLAST vs Swiss-Prot:
sp|P01053|ICI2_HORVU, E-value = 2e-14

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30286326Oryza sativaTriticum aestivum25.879.986.5982reverse complement
CNT30384527Oryza sativaTriticum turgidum39.1247.1582.26124forward
CNT30471212Oryza sativaSaccharum spontaneum29.0213.2691.392forward
CNT30578432Oryza sativaOryza barthii60.8842.693.78193forward

Expression of CNT30697502

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MVGRKSRVTGDPAGSTTMSASGMSLRITFFASSADSPTTSGHDVFRSPSPPLHAADLTTPAMID*

>peptide 2 (36 aa)
GAEGRQMREASRWWGGSRGSPATPPEARRCRRRACP*

Sequence

>CNT30697502
CGGGCGCTGAAGGAAGGCAGATGAGGGAGGCTAGCCGATGGTGGGGCGGAAGTCGAGGGTCACCGGCGACCCCGCCGGAAGCACGACGATGTCGGCGTCG
GGCATGTCCTTGAGGATCACCTTCTTCGCCTCCTCCGCCGACAGCCCCACCACCTCCGGCCACGACGTCTTCCGCTCCCCCTCGCCGCCGCTGCACGCCG
CCGACCTCACAACTCCGGCCATGATCGATTGATGATGATGAGCTATATATCAGCAATGTAAACTTTGGAGAGAGTATATATATATATATATATATATATA
TATCTAGCTTAATTAGC