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Detailed information on CNT30697485


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639395Oryza sativaNymphaea colorata12.3623.8286.8476forward
CNT30555734Oryza sativaOryza glaberrima73.550.8491.81452forward
CNT30604894Oryza sativaOryza punctata46.3411.7394.74285forward

Expression of CNT30697485

Peptides detected in this lncRNA

>peptide 1 (35 aa)
LTKFTNNAGELINVIHHISWLPDDSHISIDNLFHW*

>peptide 2 (44 aa)
MSSQESRPTRLLNSVKVVRRWSSSRVVSARLRAARTSTRARAAA*

Sequence

>CNT30697485
ACCTCACAAAATTCACCAATAATGCAGGAGAATTAATCAATGTAATCCACCATATTTCATGGCTCCCTGATGACAGCCACATTTCGATTGATAATTTATT
CCATTGGTAGCTTGATCTTGATCGATCTTAGTGTACCCCATTGGTAGCTCCGTTTCCGGCGACGACGGCGGCCGCCTTGGCCTTGGCCTTCTCCATCTCC
GTCGTGGTCTCCAGCGCCGGTGGTGCCGGGAGCGGCTTGGGAACGGAGGAGGAGGAGTTGACGGAGAAGCGAACCTCGATGTCGAGCCAGGAGTCGAGGC
CGACGAGGTTGTTGAACTCGGTGAAGGTGGTGAGGCGGTGGAGCTCGTCGCGGGTGGTCTCGGCGCGCTTGAGGGCGGCGAGGACGTCGACGAGGGCGCG
GGCGGCAGCGTAGACGGTGGTGAGGGGGGACTTGATGAGGCCGACGTCGGGGGTGCCGAGGAAGGAGCCGGAGACGGCGTAGCCGGAGATGAAGCCGGCG
TAGAACCCGGTCTTCTGGACGATCGCCGCCGACAGCGCGTCGTACACCCCGGGCATCAGCACCGCCCCCTCCGACTCGATCTTCCTCGACACACTCGTCG
ACCGCCCCGCCGCCG