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Detailed information on CNT30697441


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30110810Oryza sativaOryza longistaminata64.8257.7297.33374forward
CNT30104288Oryza sativaOryza rufipogon81.878.0296.82472forward
CNT30117868Oryza sativaOryza nivara82.3294.8197.47475forward

Expression of CNT30697441

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MGTLSSVSAIYYGDIRLVLQSSPFIQKLISYLSIVSCCFSSA*

Sequence

>CNT30697441
TTGCTTGTTTGCTTGGCCAGTGAAATGAGGTGGGTTGGGGATGGGGACATTGAGTTCTGTTAGTGCAATATATTATGGGGACATCAGATTAGTGTTGCAA
AGTAGCCCTTTCATTCAAAAACTAATATCGTATCTGTCGATTGTTTCTTGTTGTTTCTCTAGCGCATAAAAAAAATAATCTAACATATGGTATTGTACTA
TCAGGTTGCTGGGCTCCTCCCCATCACCCTCGGGCAGGTGTTGATATAAGCTGTCCTAGTCTCCTTTATTATCTTGTGCACTGTGATGAACTCCATCTAC
TTATTTTAGTTGTGTTGATGCTTCTATGAGCTTACTGTCGTGTGGTGGACTTGGTTATGTAAAATGATGTTTGGTGCTATGGTGGACTCAATTATCATCC
TGTGGTAAACTTTTGTGGACTTAAATGTGAAGTTATGTGTACTAGGTTCTGTGAACTTATTTGTAATATGGTGCTCTGTGAAGTTGGTATCTGTGTTCAA
TGTTGATGTTGGGCCTATTTGTAATGTGCTGTGAAGTTCTAATTGTTGCTCCAAATGGGCCAATGCTAAAAATTTTC