Detailed information on CNT30697365


BLAST search results

BLAST vs Swiss-Prot:
sp|O23254|GLYC4_ARATH, E-value = 2e-32

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677245Oryza sativaSetaria viridis17.6721.3691.4947forward
CNT30524209Oryza sativaSetaria italica83.4611.9790.09222forward
CNT30709157Oryza sativaGlycine max46.2419.4989.43123forward
CNT30179070Oryza sativaSecale cereale75.1940.7391.5200forward
CNT30558966Oryza sativaActinidia chinensis36.8427.8485.7198forward
CNT30249054Oryza sativaAvena sativa36.0916.1683.3396forward
CNT3074841Oryza sativaBrassica juncea36.4719.685.5797forward
CNT30650801Oryza sativaRosa chinensis46.629.4490.32124forward
CNT30365375Oryza sativaSorghum bicolor83.4639.7888.29222forward
CNT30620724Oryza sativaCajanus cajan43.6118.0783.62116forward

Expression of CNT30697365

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MTAKEVKFSEAMSSMPLRCRRFSRSRRSWTSGSAAASGVSPHDATESMAAAAVVAAARREER

>peptide 2 (87 aa)
DVVPAVVARPGHPLGVLVGERGAEGLHDGEGGEVLRGDELDAAPLPPLLPLEEVVDERVGRGERGQPPRRDGVHGGGGGGCGGEAGGE

Sequence

>CNT30697365
GACGTCGTTCCCGCCGTAGTAGCGCGCCCCGGGCATCCCCTCGGAGTACTTGTTGGTGAGCGCGGAGCCGAGGGCCTCCATGACGGCGAAGGAGGTGAAG
TTCTCCGAGGCGATGAGCTCGATGCCGCTCCGCTGCCGCCGCTTCTCCCGCTCGAGGAGGTCGTGGACGAGCGGGTCGGCCGCGGCGAGCGGGGTCAGCC
CCCACGACGCGACGGAGTCCATGGCGGCGGCGGCGGTGGTTGCGGCGGCGAGGCGGGAGGAGAGGG