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Detailed information on CNT30697329

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30524056	Oryza sativa	Setaria italica	22.92	11.18	95.04	121	forward
CNT30462400	Oryza sativa	Saccharum spontaneum	22.92	8.89	90.08	121	forward

Expression of CNT30697329

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MQYSFNFVHRSQPVTVTTHWLQCPRGTSSIAVAVVRSSSSSRFTVLIGLDRISRRSS*

>peptide 2 (43 aa)
MYIYAKLCSNQIDSQATHTGMYIKRSRKDSCDEIHDEPRMFSR*

>peptide 3 (52 aa)
MPSLASAASPSLVYLPSCASELALARRSSASCRCHAHRRGGSQARQSAPARCP

Sequence

>CNT30697329
TGTGAAGCAAGGCTAAGGGGGTAACCAGAATAATTCCAGAATCACAAGCATGTATATATACGCAAAACTTTGCAGTAACCAAATCGATTCACAGGCCACA
CATACAGGTATGTATATCAAACGCTCTAGAAAAGATTCATGTGATGAAATACATGATGAACCACGTATGTTCTCAAGGTAAAATTAATTAATGCAGTATA
GTTTTAACTTTGTCCATCGATCTCAACCTGTAACTGTGACGACACACTGGCTACAGTGCCCTCGAGGTACTAGCAGTATAGCAGTAGCTGTAGTACGTAG
CAGCAGCAGCAGCAGGTTCACTGTCTTGATTGGATTGGATCGGATTAGTAGACGTAGTTCTTGACGAACATGCCCTCCTTGGCCTCGGCGGCCTCGCCGT
CGCTGGTGTACTTGCCGAGCTGCGCCAGCGAGTTGGCCTTGGCGCGGAGGAGCAGCGCGTCCTGTCGATGCCATGCTCACCGTCGAGGAGGATCTCAGGC
TCGACAATCGGCACCAGCCCGTTGTCCT