Detailed information on CNT30697318


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676942Oryza sativaSetaria viridis36.6524.2395.76118forward
CNT30524376Oryza sativaSetaria italica36.6519.895.76118forward
CNT30297243Oryza sativaTriticum aestivum35.438.2692.98114forward
CNT30439786Oryza sativaAegilops tauschii35.432.3992.98114forward
CNT30662749Oryza sativaTriticum dicoccoides34.7840.4392.86112forward
CNT304300Oryza sativaZea mays36.6518.2992.37118forward
CNT30117872Oryza sativaOryza nivara99.3899.6999.06320forward

Expression of CNT30697318

Peptides detected in this lncRNA

>peptide 1 (46 aa)
FLSEDQNEQVFKFISQLDDNLHVHLTHSSTLLKLLPSSSRVRLKLT*

Sequence

>CNT30697318
TTCCTATCAGAAGATCAGAATGAACAGGTTTTCAAATTCATCTCCCAACTCGACGATAATTTACACGTACATTTAACACATTCTTCCACCCTTCTCAAAC
TCCTCCCTTCTTCTTCCCGGGTAAGATTAAAATTAACTTGAGGCCAGCCAGCGTCGCCGGCGGCGAGATGTTTACAGGCTGGGCGTCCTCTCGGCGGCGC
CGGAGATGACGGTGAGCAGGTTGTTGATGGGGATGCTGTTGCCGAAGTAGTTGAGGGTGTTGCCGTCCAGGAGGAGGGCGCCGGTCTGCATATACCATGA
GTGAGTTCACTTCAGTTCAGAG